RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 IGLV4-60A0A075B6I1 120 aa12.74□□□□□ -0.37
SFXN1-203ENST00000502393 IGLV10-54A0A075B6I4 117 aa12.74□□□□□ -0.37
SFXN1-203ENST00000502393 UBE2L6O14933 153 aa12.74□□□□□ -0.37
SFXN1-203ENST00000502393 KRTAP10-4P60372 401 aaPredicted RBP12.74□□□□□ -0.37
SFXN1-203ENST00000502393 COTL1Q14019 142 aa12.74□□□□□ -0.37
SFXN1-203ENST00000502393 Q6ZNX1 250 aa12.74□□□□□ -0.37
SFXN1-203ENST00000502393 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
SFXN1-203ENST00000502393 AMTP48728 403 aa12.72□□□□□ -0.37
SFXN1-203ENST00000502393 BLOC1S1P78537 153 aa12.72□□□□□ -0.37
SFXN1-203ENST00000502393 GATD1Q8NB37 220 aa12.72□□□□□ -0.37
SFXN1-203ENST00000502393 SMIM15Q7Z3B0 74 aa12.71□□□□□ -0.37
SFXN1-203ENST00000502393 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
SFXN1-203ENST00000502393 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
SFXN1-203ENST00000502393 GFRA4Q9GZZ7 299 aa12.71□□□□□ -0.37
SFXN1-203ENST00000502393 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
SFXN1-203ENST00000502393 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
SFXN1-203ENST00000502393 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 hDV102S1A0JD36 115 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 TEX261Q6UWH6 196 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 SDIM1Q6ZPB5 146 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
SFXN1-203ENST00000502393 GATCO43716 136 aaKnown RBP12.68□□□□□ -0.38
SFXN1-203ENST00000502393 A8MWL6 223 aa12.67□□□□□ -0.38
SFXN1-203ENST00000502393 NCR2O95944 276 aa12.67□□□□□ -0.38
SFXN1-203ENST00000502393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
SFXN1-203ENST00000502393 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
SFXN1-203ENST00000502393 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
SFXN1-203ENST00000502393 AP5S1Q9NUS5 200 aa12.66□□□□□ -0.38
SFXN1-203ENST00000502393 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.65□□□□□ -0.38
SFXN1-203ENST00000502393 H7C423 109 aa12.65□□□□□ -0.38
SFXN1-203ENST00000502393 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
SFXN1-203ENST00000502393 CT83Q5H943 113 aa12.65□□□□□ -0.38
SFXN1-203ENST00000502393 PANO1I0J062 215 aa12.64□□□□□ -0.39
SFXN1-203ENST00000502393 OXTP01178 125 aa12.64□□□□□ -0.39
SFXN1-203ENST00000502393 CEBPGP53567 150 aa12.64□□□□□ -0.39
SFXN1-203ENST00000502393 AMMECR1LQ6DCA0 310 aa12.64□□□□□ -0.39
SFXN1-203ENST00000502393 SDHAF1A6NFY7 115 aa12.63□□□□□ -0.39
SFXN1-203ENST00000502393 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
SFXN1-203ENST00000502393 CIRBPQ14011 172 aaKnown RBP12.63□□□□□ -0.39
SFXN1-203ENST00000502393 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
SFXN1-203ENST00000502393 LRP1Q07954 4544 aaKnown RBP12.63□□□□□ -0.39
SFXN1-203ENST00000502393 hCG_2014768A0A024R1R8 64 aa12.62□□□□□ -0.39
SFXN1-203ENST00000502393 IGHV3-64A0A075B6Q5 118 aa12.62□□□□□ -0.39
SFXN1-203ENST00000502393 APCSP02743 223 aa12.62□□□□□ -0.39
SFXN1-203ENST00000502393 SLPIP03973 132 aa12.62□□□□□ -0.39
SFXN1-203ENST00000502393 BORCS7Q96B45 105 aa12.62□□□□□ -0.39
SFXN1-203ENST00000502393 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
SFXN1-203ENST00000502393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-203ENST00000502393 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
SFXN1-203ENST00000502393 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
SFXN1-203ENST00000502393 IGKV2-29A2NJV5 120 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-203ENST00000502393 GAGE12HA6NDE8 117 aa12.61□□□□□ -0.39
SFXN1-203ENST00000502393 I3L3M4 83 aa12.6□□□□□ -0.39
SFXN1-203ENST00000502393 FGF6P10767 208 aa12.6□□□□□ -0.39
SFXN1-203ENST00000502393 RNASEKQ6P5S7 137 aaKnown RBP12.6□□□□□ -0.39
SFXN1-203ENST00000502393 LINC01551Q86U37 167 aa12.6□□□□□ -0.39
SFXN1-203ENST00000502393 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
SFXN1-203ENST00000502393 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
SFXN1-203ENST00000502393 ZNF25P17030 456 aaPredicted RBP12.59□□□□□ -0.39
SFXN1-203ENST00000502393 PMCHP20382 165 aa12.59□□□□□ -0.39
SFXN1-203ENST00000502393 C15orf56Q8N910 161 aa12.59□□□□□ -0.39
SFXN1-203ENST00000502393 CHCHD10Q8WYQ3 142 aaPredicted RBP12.59□□□□□ -0.39
SFXN1-203ENST00000502393 FAM210AQ96ND0 272 aa12.59□□□□□ -0.39
SFXN1-203ENST00000502393 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 DPH3Q96FX2 82 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 RNF185Q96GF1 192 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 TMEM191AQ9H0A3 160 aa12.58□□□□□ -0.4
SFXN1-203ENST00000502393 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
SFXN1-203ENST00000502393 ST20Q9HBF5 79 aa12.57□□□□□ -0.4
SFXN1-203ENST00000502393 OSTCQ9NRP0 149 aa12.57□□□□□ -0.4
SFXN1-203ENST00000502393 FAT3Q8TDW7 4589 aa12.56□□□□□ -0.4
SFXN1-203ENST00000502393 RPS10P46783 165 aaKnown RBP12.56□□□□□ -0.4
SFXN1-203ENST00000502393 SERTAD4-AS1Q5TG53 156 aa12.56□□□□□ -0.4
SFXN1-203ENST00000502393 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
SFXN1-203ENST00000502393 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
SFXN1-203ENST00000502393 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
SFXN1-203ENST00000502393 GAS8-AS1O95177 125 aa12.55□□□□□ -0.4
SFXN1-203ENST00000502393 ESDP10768 282 aa12.55□□□□□ -0.4
SFXN1-203ENST00000502393 SPACA4Q8TDM5 124 aa12.55□□□□□ -0.4
SFXN1-203ENST00000502393 A0A087WYN8 130 aa12.54□□□□□ -0.4
SFXN1-203ENST00000502393 TSHBP01222 138 aa12.54□□□□□ -0.4
SFXN1-203ENST00000502393 SRP19P09132 144 aaKnown RBP12.54□□□□□ -0.4
SFXN1-203ENST00000502393 HNRNPA3P51991 378 aaKnown RBP12.54□□□□□ -0.4
SFXN1-203ENST00000502393 HIGD2BQ4VC39 106 aa12.54□□□□□ -0.4
SFXN1-203ENST00000502393 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
SFXN1-203ENST00000502393 GVQW2A0A096LPI5 108 aaPredicted RBP12.53□□□□□ -0.4
SFXN1-203ENST00000502393 CHTF8P0CG12 524 aa12.53□□□□□ -0.4
SFXN1-203ENST00000502393 RAB4AP20338 218 aa12.53□□□□□ -0.4
SFXN1-203ENST00000502393 POLR2KP53803 58 aaKnown RBP12.53□□□□□ -0.4
SFXN1-203ENST00000502393 FOXI1Q12951 378 aa12.53□□□□□ -0.4
SFXN1-203ENST00000502393 PKHD1L1Q86WI1 4243 aa12.52□□□□□ -0.4
SFXN1-203ENST00000502393 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.41
SFXN1-203ENST00000502393 COX6A2Q02221 97 aa12.52□□□□□ -0.41
SFXN1-203ENST00000502393 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
SFXN1-203ENST00000502393 LINC00959A0A1B0GUT2 108 aa12.51□□□□□ -0.41
SFXN1-203ENST00000502393 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
SFXN1-203ENST00000502393 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms