RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 D6R8Y8 96 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 CCL25O15444 150 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 TNFRSF6BO95407 300 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 PPP1R17O96001 155 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 EVI2AP22794 236 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 TIRAPP58753 221 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 ZNF415Q09FC8 603 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 PTH2Q96A98 100 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 MRAP2Q96G30 205 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 C9orf85Q96MD7 179 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 B9D2Q9BPU9 175 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 SPXQ9BT56 116 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 XCL2Q9UBD3 114 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 U3KQK5 164 aa3.84□□□□□ -1.79
HMGXB4-208ENST00000498325 HUWE1Q7Z6Z7 4374 aaKnown RBP3.84□□□□□ -1.8
HMGXB4-208ENST00000498325 NXPH4O95158 308 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 HTN1P15515 57 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 ZNF876PQ49A33 203 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 PIK3CD-AS1Q5SR53 167 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 FA2HQ7L5A8 372 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 DEFB125Q8N687 156 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 C14orf178Q8N769 122 aaPredicted RBP3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 RCHY1Q96PM5 261 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 TMEM70Q9BUB7 260 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 MAP1LC3AQ9H492 121 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 HSPB8Q9UJY1 196 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 HECTD4Q9Y4D8 3996 aa3.83□□□□□ -1.8
HMGXB4-208ENST00000498325 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 IGHV3OR16-12A0A075B7B8 117 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 PRSS47A8MTI9 375 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 A8MWV9 139 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 K7ERU9 68 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 M0R2P5 195 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 MGPP08493 103 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 RBMY1A1P0DJD3 496 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 IGLL1P15814 213 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 RPL35AP18077 110 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 HINT1P49773 126 aaPredicted RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 SEC11AP67812 179 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 RBMY1FQ15415 496 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 VAMP3Q15836 100 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 SLC25A34Q6PIV7 304 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 C1orf158Q8N1D5 194 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 RNASE8Q8TDE3 154 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 CSTL1Q9H114 145 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 NXT2Q9NPJ8 142 aaKnown RBP3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 STAB2Q8WWQ8 2551 aa3.82□□□□□ -1.8
HMGXB4-208ENST00000498325 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 H7C1H1 209 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 SPRY2O43597 315 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 NCR2O95944 276 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 NPYP01303 97 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 APOC4P55056 127 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 RRN3P1Q2M238 152 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 OCIAD2Q56VL3 154 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 ZFAND6Q6FIF0 208 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 POM121L12Q8N7R1 296 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 Q8N8P6 123 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 TMEM263Q8WUH6 116 aaKnown RBP3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 C16orf74Q96GX8 76 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 C20orf78Q9BR46 151 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 MAP1LC3CQ9BXW4 147 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 KIF25-AS1Q9Y6Z4 181 aa3.81□□□□□ -1.8
HMGXB4-208ENST00000498325 AGRNO00468 2067 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 SMIM9A6NGZ8 99 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 SYS1-DBNDD2H3BUS1 97 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 K7EMI3 77 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 RHODO00212 210 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 CIDEAO60543 219 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 CRYGDP07320 174 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 AZU1P20160 251 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 IFI27P40305 119 aaPredicted RBP3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 ZNF56Q15929 161 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 LGALS9BQ3B8N2 356 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 BVES-AS1Q5T3Y7 98 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 DGAT2L7PQ6IED9 249 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 GTF2H5Q6ZYL4 71 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 SPATA12Q7Z6I5 190 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 C11orf72Q8NBR9 251 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 CSNK1G2-AS1Q8NCQ2 148 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 URB1-AS1Q96HZ7 61 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 CST9LQ9H4G1 147 aa3.8□□□□□ -1.8
HMGXB4-208ENST00000498325 TRAV26-2A0A0B4J265 109 aa3.79□□□□□ -1.8
HMGXB4-208ENST00000498325 IGHV1-24A0A0C4DH33 117 aa3.79□□□□□ -1.8
HMGXB4-208ENST00000498325 A6NDN8 102 aa3.79□□□□□ -1.8
HMGXB4-208ENST00000498325 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
HMGXB4-208ENST00000498325 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms