RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
ELL3-208ENST00000497700 TRAV4A0A0B4J268 109 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 FUSP35637 526 aaKnown RBP eCLIP12.34□□□□□ -0.43
ELL3-208ENST00000497700 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 NRACQ8N912 160 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 OR4C5Q8NGB2 326 aa12.34□□□□□ -0.43
ELL3-208ENST00000497700 SERF1AO75920 110 aa12.33□□□□□ -0.44
ELL3-208ENST00000497700 ZNF56Q15929 161 aa12.33□□□□□ -0.44
ELL3-208ENST00000497700 CIDEAO60543 219 aa12.32□□□□□ -0.44
ELL3-208ENST00000497700 PPP1R17O96001 155 aa12.32□□□□□ -0.44
ELL3-208ENST00000497700 C18orf15Q96N68 181 aa12.32□□□□□ -0.44
ELL3-208ENST00000497700 TRGV2A0A075B6R0 118 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 PRSS47A8MTI9 375 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 M0QY20 66 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 LINC00310P59036 64 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 TTC32Q5I0X7 151 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 MAP1LC3AQ9H492 121 aa12.31□□□□□ -0.44
ELL3-208ENST00000497700 PCP4L1A6NKN8 68 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 NUPR1O60356 82 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 NIT1Q86X76 327 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
ELL3-208ENST00000497700 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 UPK3BQ9BT76 320 aa12.3□□□□□ -0.44
ELL3-208ENST00000497700 MRPS16Q9Y3D3 137 aaKnown RBP12.3□□□□□ -0.44
ELL3-208ENST00000497700 H7C1H1 209 aa12.29□□□□□ -0.44
ELL3-208ENST00000497700 Q6ZSN1 163 aa12.29□□□□□ -0.44
ELL3-208ENST00000497700 URB1-AS1Q96HZ7 61 aa12.29□□□□□ -0.44
ELL3-208ENST00000497700 C20orf78Q9BR46 151 aa12.29□□□□□ -0.44
ELL3-208ENST00000497700 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
ELL3-208ENST00000497700 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
ELL3-208ENST00000497700 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
ELL3-208ENST00000497700 HERC1Q15751 4861 aa12.28□□□□□ -0.44
ELL3-208ENST00000497700 A0A096LPF7 62 aa12.27□□□□□ -0.45
ELL3-208ENST00000497700 TRBV6-5A0A0K0K1A5 114 aa12.27□□□□□ -0.45
ELL3-208ENST00000497700 LINC00614P0C842 121 aa12.27□□□□□ -0.45
ELL3-208ENST00000497700 IFI27P40305 119 aaPredicted RBP12.27□□□□□ -0.45
ELL3-208ENST00000497700 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.45
ELL3-208ENST00000497700 CHCHD1Q96BP2 118 aaKnown RBP12.27□□□□□ -0.45
ELL3-208ENST00000497700 BTF3P20290 206 aaKnown RBP12.26□□□□□ -0.45
ELL3-208ENST00000497700 PMCHP20382 165 aa12.26□□□□□ -0.45
ELL3-208ENST00000497700 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
ELL3-208ENST00000497700 Q6ZRN7 208 aaPredicted RBP12.26□□□□□ -0.45
ELL3-208ENST00000497700 FA2HQ7L5A8 372 aa12.26□□□□□ -0.45
ELL3-208ENST00000497700 Q8N8P6 123 aa12.26□□□□□ -0.45
ELL3-208ENST00000497700 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
ELL3-208ENST00000497700 NXT2Q9NPJ8 142 aaKnown RBP12.26□□□□□ -0.45
ELL3-208ENST00000497700 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
ELL3-208ENST00000497700 FHL2Q14192 279 aa12.25□□□□□ -0.45
ELL3-208ENST00000497700 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
ELL3-208ENST00000497700 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
ELL3-208ENST00000497700 TRGV4A0A0C4DH28 118 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 H3BNG1 76 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 HSBP1O75506 76 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 AMTP48728 403 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 POLR2KP53803 58 aaKnown RBP12.24□□□□□ -0.45
ELL3-208ENST00000497700 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
ELL3-208ENST00000497700 PKIAP61925 76 aa12.23□□□□□ -0.45
ELL3-208ENST00000497700 TMEM70Q9BUB7 260 aa12.23□□□□□ -0.45
ELL3-208ENST00000497700 AP5S1Q9NUS5 200 aa12.23□□□□□ -0.45
ELL3-208ENST00000497700 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 TRBV6-4A0A1B0GX49 114 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 K7EQD1 137 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 Q9UF83 564 aa12.22□□□□□ -0.45
ELL3-208ENST00000497700 FAT1Q14517 4588 aa12.21□□□□□ -0.45
ELL3-208ENST00000497700 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.45
ELL3-208ENST00000497700 EPM2AB3EWF7 344 aa12.21□□□□□ -0.45
ELL3-208ENST00000497700 TSTD3H0UI37 97 aa12.21□□□□□ -0.45
ELL3-208ENST00000497700 VCYO14598 125 aa12.21□□□□□ -0.45
ELL3-208ENST00000497700 TRBV27A0A0K0K1C4 114 aa12.2□□□□□ -0.46
ELL3-208ENST00000497700 SIVA1O15304 175 aa12.2□□□□□ -0.46
ELL3-208ENST00000497700 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
ELL3-208ENST00000497700 K7EMI3 77 aa12.19□□□□□ -0.46
ELL3-208ENST00000497700 FAM19A2Q8N3H0 131 aa12.19□□□□□ -0.46
ELL3-208ENST00000497700 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
ELL3-208ENST00000497700 IGHV1-24A0A0C4DH33 117 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 TCAPO15273 167 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 XGP55808 180 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 RHOHQ15669 191 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 CDPF1Q6NVV7 123 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
ELL3-208ENST00000497700 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 CRYBA4P53673 196 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 RPL36AP83881 106 aaKnown RBP12.17□□□□□ -0.46
ELL3-208ENST00000497700 LAGE3Q14657 143 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 RPL36ALQ969Q0 106 aaKnown RBP12.17□□□□□ -0.46
ELL3-208ENST00000497700 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
ELL3-208ENST00000497700 I3L3M4 83 aa12.16□□□□□ -0.46
ELL3-208ENST00000497700 PAX4O43316 350 aa12.16□□□□□ -0.46
ELL3-208ENST00000497700 KRTAP10-1P60331 282 aa12.16□□□□□ -0.46
ELL3-208ENST00000497700 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms