RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 SONP18583 2426 aaKnown RBP4.46□□□□□ -1.7
USF3-204ENST00000496826 A0A0J9YWU9 116 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 LINC00482Q8N8I6 264 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 KAAG1Q9UBP8 84 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 IGHV7-81A0A0B4J1V7 117 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 Q6ZSR3 168 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 RALGAPA2Q2PPJ7 1873 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 ATAD5Q96QE3 1844 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 ARHGAP21Q5T5U3 1957 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 DOCK5Q9H7D0 1870 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 LYPD6Q86Y78 171 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 PLA2G2FQ9BZM2 168 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 UQCR11O14957 56 aa4.46□□□□□ -1.7
USF3-204ENST00000496826 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
USF3-204ENST00000496826 ABCA3Q99758 1704 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 LY6G6EA0A0G2JKS1 128 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 IGFBP6P24592 240 aaPredicted RBP4.45□□□□□ -1.7
USF3-204ENST00000496826 CRYBA2P53672 197 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 C4orf51C9J302 202 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 LINC01555Q8NAE3 123 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 TRPM3Q9HCF6 1732 aaPredicted RBP4.45□□□□□ -1.7
USF3-204ENST00000496826 LINC00473A8K010 186 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 RLFQ13129 1914 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 TSHBP01222 138 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 DSCAML1Q8TD84 2053 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 BCORL1Q5H9F3 1711 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
USF3-204ENST00000496826 AHDC1Q5TGY3 1603 aaPredicted RBP4.44□□□□□ -1.7
USF3-204ENST00000496826 CSRP3P50461 194 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 CYSRT1A8MQ03 144 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 LY6G6DO95868 133 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 Q6ZS92 163 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 PCDH15Q96QU1 1955 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 BTAF1O14981 1849 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 IGLV9-49A0A0B4J1Y8 123 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 MBD6Q96DN6 1003 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 TCF20Q9UGU0 1960 aaKnown RBP4.44□□□□□ -1.7
USF3-204ENST00000496826 SPINK1P00995 79 aa4.44□□□□□ -1.7
USF3-204ENST00000496826 ZNF833PQ6ZTB9 187 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
USF3-204ENST00000496826 C6orf48Q9UBA6 75 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 NUP188Q5SRE5 1749 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 PKD1L3Q7Z443 1732 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
USF3-204ENST00000496826 ROS1P08922 2347 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 IGF2-ASQ6U949 168 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 KDM3BQ7LBC6 1761 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 C11orf53Q8IXP5 236 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 HIVEP2P31629 2446 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 C3orf84H3BNL1 204 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 C17orf82Q86X59 251 aaPredicted RBP4.43□□□□□ -1.7
USF3-204ENST00000496826 C9orf106Q8NAJ2 232 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 NRGNQ92686 78 aa4.43□□□□□ -1.7
USF3-204ENST00000496826 EML5Q05BV3 1969 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
USF3-204ENST00000496826 NWD2Q9ULI1 1742 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 IGLV3-21P80748 117 aaPredicted RBP4.42□□□□□ -1.7
USF3-204ENST00000496826 Q6ZR03 302 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 IL25Q9H293 177 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 MLANAQ16655 118 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 LTN1O94822 1766 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 KNDC1Q76NI1 1749 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 ALS2Q96Q42 1657 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 K7ERJ3 54 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 CRYGAP11844 174 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 PSORS1C2Q9UIG4 136 aa4.42□□□□□ -1.7
USF3-204ENST00000496826 A0A096LNI7 61 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 RGPD2P0DJD1 1756 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 LCTP09848 1927 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 TNRC6CQ9HCJ0 1690 aaKnown RBP4.41□□□□□ -1.7
USF3-204ENST00000496826 SIPA1L1O43166 1804 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 ARFGEF1Q9Y6D6 1849 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 TMEM131Q92545 1883 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 LY6HO94772 140 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 LELP1Q5T871 98 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 TICRRQ7Z2Z1 1910 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 SLPIP03973 132 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 HRES1P13985 223 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 C1orf137Q5JT78 98 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 PRSS33Q8NF86 280 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
USF3-204ENST00000496826 CD24P25063 80 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 HRCT1Q6UXD1 115 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 C22orf34Q6ZV56 151 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 WFDC5Q8TCV5 224 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 LRRC37A3O60309 1634 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 SMIM1B2RUZ4 78 aa4.41□□□□□ -1.7
USF3-204ENST00000496826 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms