RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PRSS47A8MTI9 375 aa14.94□□□□□ -0.02
C9orf3-222ENST00000496567 KIR2DL4Q99706 377 aa14.94□□□□□ -0.02
C9orf3-222ENST00000496567 SMIM2Q9BVW6 85 aa14.94□□□□□ -0.02
C9orf3-222ENST00000496567 LY6G6CO95867 125 aa14.94□□□□□ -0.02
C9orf3-222ENST00000496567 TRBV25-1A0A075B6N4 114 aa14.93□□□□□ -0.02
C9orf3-222ENST00000496567 NTM-AS1Q6ZSK4 140 aa14.93□□□□□ -0.02
C9orf3-222ENST00000496567 IGHV1-24A0A0C4DH33 117 aa14.92□□□□□ -0.02
C9orf3-222ENST00000496567 TCAPO15273 167 aa14.91□□□□□ -0.02
C9orf3-222ENST00000496567 IQCJQ1A5X6 159 aa14.91□□□□□ -0.02
C9orf3-222ENST00000496567 LYSTQ99698 3801 aa14.91□□□□□ -0.02
C9orf3-222ENST00000496567 LOC389332A0A1B0GUA5 103 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 FCER1GP30273 86 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 AMTP48728 403 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 DEFB104AQ8WTQ1 72 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 TSHBP01222 138 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 NDUFA6P56556 154 aa14.9□□□□□ -0.02
C9orf3-222ENST00000496567 NXT2Q9NPJ8 142 aaKnown RBP14.9□□□□□ -0.02
C9orf3-222ENST00000496567 SIVA1O15304 175 aa14.89□□□□□ -0.03
C9orf3-222ENST00000496567 WFDC10BQ8IUB3 73 aa14.89□□□□□ -0.03
C9orf3-222ENST00000496567 TMEM243Q9BU79 118 aa14.89□□□□□ -0.03
C9orf3-222ENST00000496567 Q9H8V8 135 aa14.89□□□□□ -0.03
C9orf3-222ENST00000496567 Q8N8P6 123 aa14.88□□□□□ -0.03
C9orf3-222ENST00000496567 CHCHD5Q9BSY4 110 aa14.88□□□□□ -0.03
C9orf3-222ENST00000496567 IGLV2-18A0A075B6J9 118 aa14.87□□□□□ -0.03
C9orf3-222ENST00000496567 PKIAP61925 76 aa14.87□□□□□ -0.03
C9orf3-222ENST00000496567 LCE6AA0A183 80 aa14.86□□□□□ -0.03
C9orf3-222ENST00000496567 PRSS3P2Q8NHM4 247 aa14.86□□□□□ -0.03
C9orf3-222ENST00000496567 C18orf32Q8TCD1 76 aa14.86□□□□□ -0.03
C9orf3-222ENST00000496567 ALMS1Q8TCU4 4167 aa14.86□□□□□ -0.03
C9orf3-222ENST00000496567 S100A6P06703 90 aa14.85□□□□□ -0.03
C9orf3-222ENST00000496567 IFI27P40305 119 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-222ENST00000496567 K7EMI3 77 aa14.85□□□□□ -0.03
C9orf3-222ENST00000496567 UBE2L6O14933 153 aa14.85□□□□□ -0.03
C9orf3-222ENST00000496567 Q0VG73 95 aa14.85□□□□□ -0.03
C9orf3-222ENST00000496567 NIT1Q86X76 327 aa14.85□□□□□ -0.03
C9orf3-222ENST00000496567 TMEM262E9PQX1 116 aa14.84□□□□□ -0.03
C9orf3-222ENST00000496567 DNAH10OSP0CZ25 163 aa14.84□□□□□ -0.03
C9orf3-222ENST00000496567 ESDP10768 282 aa14.84□□□□□ -0.03
C9orf3-222ENST00000496567 CHCHD7Q9BUK0 85 aa14.84□□□□□ -0.03
C9orf3-222ENST00000496567 H7C423 109 aa14.83□□□□□ -0.04
C9orf3-222ENST00000496567 SNRPEP62304 92 aaKnown RBP14.83□□□□□ -0.04
C9orf3-222ENST00000496567 LINC01556Q5JQF7 62 aa14.83□□□□□ -0.04
C9orf3-222ENST00000496567 VPS13DQ5THJ4 4388 aa14.83□□□□□ -0.04
C9orf3-222ENST00000496567 A0A087WX48 190 aa14.82□□□□□ -0.04
C9orf3-222ENST00000496567 BAGE3Q86Y29 109 aa14.82□□□□□ -0.04
C9orf3-222ENST00000496567 GAGE6Q13070 117 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 ORMDL2Q53FV1 153 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 COA6Q5JTJ3 125 aaKnown RBP14.81□□□□□ -0.04
C9orf3-222ENST00000496567 FA2HQ7L5A8 372 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 TMEM18Q96B42 140 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 TRAV9-2A0A087WT02 112 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 K7EP13 123 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 LAGE3Q14657 143 aa14.81□□□□□ -0.04
C9orf3-222ENST00000496567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-222ENST00000496567 IGKV2-29A2NJV5 120 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-222ENST00000496567 C5orf52A6NGY3 159 aa14.8□□□□□ -0.04
C9orf3-222ENST00000496567 LINC00310P59036 64 aa14.8□□□□□ -0.04
C9orf3-222ENST00000496567 IGHV3-30P01768 117 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 IGHV3-33P01772 117 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 IGHV3-30-3P0DP02 117 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 IGHV3-30-5P0DP03 117 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 SMAGPQ0VAQ4 97 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 TTC32Q5I0X7 151 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 C20orf203Q8NBC4 194 aa14.79□□□□□ -0.04
C9orf3-222ENST00000496567 LINC01546A6NGU7 62 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 NUPR1O60356 82 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 SERF1AO75920 110 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 AMMECR1LQ6DCA0 310 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 C10orf126Q8N4M7 172 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 DNAH1Q9P2D7 4330 aa14.78□□□□□ -0.04
C9orf3-222ENST00000496567 NBDYA0A0U1RRE5 68 aa14.77□□□□□ -0.04
C9orf3-222ENST00000496567 A0A1B0GUV1 79 aa14.77□□□□□ -0.04
C9orf3-222ENST00000496567 G0S2P27469 103 aa14.77□□□□□ -0.04
C9orf3-222ENST00000496567 MPV17L2Q567V2 206 aa14.77□□□□□ -0.04
C9orf3-222ENST00000496567 URB1-AS1Q96HZ7 61 aa14.77□□□□□ -0.04
C9orf3-222ENST00000496567 LINC00614P0C842 121 aa14.77□□□□□ -0.05
C9orf3-222ENST00000496567 FGF6P10767 208 aa14.77□□□□□ -0.05
C9orf3-222ENST00000496567 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
C9orf3-222ENST00000496567 ZNF25P17030 456 aaPredicted RBP14.76□□□□□ -0.05
C9orf3-222ENST00000496567 RBX1P62877 108 aa14.76□□□□□ -0.05
C9orf3-222ENST00000496567 PDZD11Q5EBL8 140 aa14.76□□□□□ -0.05
C9orf3-222ENST00000496567 Q8N3U1 123 aa14.76□□□□□ -0.05
C9orf3-222ENST00000496567 RNASEKQ6P5S7 137 aaKnown RBP14.75□□□□□ -0.05
C9orf3-222ENST00000496567 MRPL52Q86TS9 123 aaKnown RBP14.75□□□□□ -0.05
C9orf3-222ENST00000496567 Q8N976 141 aa14.74□□□□□ -0.05
C9orf3-222ENST00000496567 TMEM101Q96IK0 257 aa14.74□□□□□ -0.05
C9orf3-222ENST00000496567 HIST3H2BBQ8N257 126 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 CYSLTR1Q9Y271 337 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 M0R2N4 97 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 ANGP03950 147 aaKnown RBP14.73□□□□□ -0.05
C9orf3-222ENST00000496567 BTF3P20290 206 aaKnown RBP14.73□□□□□ -0.05
C9orf3-222ENST00000496567 RPL39P62891 51 aaKnown RBP14.73□□□□□ -0.05
C9orf3-222ENST00000496567 DGAT2L7PQ6IED9 249 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 C2orf66Q6UXQ4 117 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 CHCHD1Q96BP2 118 aaKnown RBP14.73□□□□□ -0.05
C9orf3-222ENST00000496567 TIMM21Q9BVV7 248 aa14.73□□□□□ -0.05
C9orf3-222ENST00000496567 LINC01549A6NIU2 74 aa14.72□□□□□ -0.05
C9orf3-222ENST00000496567 OR5A1Q8NGJ0 315 aa14.72□□□□□ -0.05
C9orf3-222ENST00000496567 KLK12Q9UKR0 248 aa14.72□□□□□ -0.05
C9orf3-222ENST00000496567 UBE2D4Q9Y2X8 147 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms