RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HCG22E2RYF7 251 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 KRTDAPP60985 99 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 SSBP1Q04837 148 aaKnown RBP1.4□□□□□ -2.19
CLK1-214ENST00000496205 C10orf82Q8WW14 230 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 BET1LQ9NYM9 111 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 SCP2D1Q9UJQ7 156 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 IFT172Q9UG01 1749 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 RNF17Q9BXT8 1623 aaKnown RBP1.4□□□□□ -2.19
CLK1-214ENST00000496205 PTPN23Q9H3S7 1636 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 KDM5DQ9BY66 1539 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 CEP162Q5TB80 1403 aa1.4□□□□□ -2.19
CLK1-214ENST00000496205 ERCC6L2Q5T890 1561 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 INO80Q9ULG1 1556 aaPredicted RBP1.39□□□□□ -2.19
CLK1-214ENST00000496205 MED14O60244 1454 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 ADGRL2O95490 1459 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 NCOA2Q15596 1464 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 SHANK2Q9UPX8 1470 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 FXYD4P59646 89 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 PYY3Q5JQD4 70 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 FAM74A4Q5TZK3 123 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 V9GYS6 101 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 LRRC37A3O60309 1634 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 EPRSP07814 1512 aaKnown RBP1.39□□□□□ -2.19
CLK1-214ENST00000496205 AGLP35573 1532 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 EHBP1L1Q8N3D4 1523 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 SCAPERQ9BY12 1400 aa1.39□□□□□ -2.19
CLK1-214ENST00000496205 RRBP1Q9P2E9 1410 aaKnown RBP1.39□□□□□ -2.19
CLK1-214ENST00000496205 PATJQ8NI35 1801 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 ABCA3Q99758 1704 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 PIK3C2BO00750 1634 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 KIF14Q15058 1648 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 IQGAP3Q86VI3 1631 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 MROH1Q8NDA8 1641 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 RBAKDNA6NC62 111 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 NAP1L6A6NFF2 107 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 UBA52P62987 128 aaKnown RBP1.38□□□□□ -2.19
CLK1-214ENST00000496205 FXYD3Q14802 87 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 Q6ZQY7 126 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 ZGRF1Q86YA3 2104 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 LMTK2Q8IWU2 1503 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.38□□□□□ -2.19
CLK1-214ENST00000496205 CLIP1P30622 1438 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 UACAQ9BZF9 1416 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 INTS1Q8N201 2190 aaKnown RBP1.38□□□□□ -2.19
CLK1-214ENST00000496205 EP400Q96L91 3159 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 PARP14Q460N5 1801 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 UNC13BO14795 1591 aa1.38□□□□□ -2.19
CLK1-214ENST00000496205 ATP10BO94823 1461 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 LRRC9Q6ZRR7 1453 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 MLH3Q9UHC1 1453 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 ABCA6Q8N139 1617 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 MADDQ8WXG6 1647 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 ABCC1P33527 1531 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 PRDM15P57071 1507 aaPredicted RBP1.37□□□□□ -2.19
CLK1-214ENST00000496205 MYH8P13535 1937 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 COL4A1P02462 1669 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 RREB1Q92766 1687 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 NBDYA0A0U1RRE5 68 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 LOC101927531A0A1B0GV80 90 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
CLK1-214ENST00000496205 CCL3L1P16619 93 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 CAV3P56539 151 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 ELOF1P60002 83 aaKnown RBP1.37□□□□□ -2.19
CLK1-214ENST00000496205 KLKP1Q107X0 134 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 ZNF56Q15929 161 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 C10orf99Q6UWK7 81 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 LINC00312Q9Y6C7 94 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 PSME4Q14997 1843 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 SAMD9LQ8IVG5 1584 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 ARAP2Q8WZ64 1704 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 PEAK1Q9H792 1746 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 NRXN2Q9P2S2 1712 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 PLEKHH2Q8IVE3 1493 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 TMEM131LA2VDJ0 1609 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 LAMC1P11047 1609 aa1.37□□□□□ -2.19
CLK1-214ENST00000496205 PHRF1Q9P1Y6 1649 aaKnown RBP1.37□□□□□ -2.19
CLK1-214ENST00000496205 EFCAB6Q5THR3 1501 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 TET3O43151 1660 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 TOPAZ1Q8N9V7 1692 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 CASP8AP2Q9UKL3 1982 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 J3QKU1 62 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 TFF1P04155 84 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 SNCAP37840 140 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 C20orf197Q8N268 126 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 C5orf56Q8N8D9 126 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 COX7B2Q8TF08 81 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 VAMP8Q9BV40 100 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 SPAG17Q6Q759 2223 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 PPLO60437 1756 aa1.36□□□□□ -2.19
CLK1-214ENST00000496205 DOCK1Q14185 1865 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 KNDC1Q76NI1 1749 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 UTRNP46939 3433 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 SMIM31A0A1B0GVY4 71 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 NDUFC1O43677 76 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 GNG11P61952 73 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 Q0VG73 95 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 C10orf128Q5T292 105 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms