RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 FER1L6-AS1Q8NA97 138 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 NIT2Q9NQR4 276 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
VARS-228ENST00000495010 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
VARS-228ENST00000495010 KRTAP10-8P60410 259 aa8.91□□□□□ -0.98
VARS-228ENST00000495010 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
VARS-228ENST00000495010 AMMECR1LQ6DCA0 310 aa8.91□□□□□ -0.98
VARS-228ENST00000495010 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
VARS-228ENST00000495010 TNXBP22105 4242 aa8.9□□□□□ -0.98
VARS-228ENST00000495010 TRGC1P0CF51 173 aa8.9□□□□□ -0.98
VARS-228ENST00000495010 FAM213BQ8TBF2 198 aa8.9□□□□□ -0.98
VARS-228ENST00000495010 A0A096LNI7 61 aa8.89□□□□□ -0.99
VARS-228ENST00000495010 ARPC5O15511 151 aa8.89□□□□□ -0.99
VARS-228ENST00000495010 Q6ZRP5 223 aa8.89□□□□□ -0.99
VARS-228ENST00000495010 KCNRGQ8N5I3 272 aa8.89□□□□□ -0.99
VARS-228ENST00000495010 OR2D3Q8NGH3 330 aa8.89□□□□□ -0.99
VARS-228ENST00000495010 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
VARS-228ENST00000495010 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
VARS-228ENST00000495010 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
VARS-228ENST00000495010 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
VARS-228ENST00000495010 RPL35P42766 123 aaKnown RBP8.88□□□□□ -0.99
VARS-228ENST00000495010 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
VARS-228ENST00000495010 MBD3L1Q8WWY6 194 aa8.88□□□□□ -0.99
VARS-228ENST00000495010 CYTL1Q9NRR1 136 aa8.88□□□□□ -0.99
VARS-228ENST00000495010 F2Z2F3 143 aa8.87□□□□□ -0.99
VARS-228ENST00000495010 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
VARS-228ENST00000495010 IFNA1P01562 189 aa8.85□□□□□ -0.99
VARS-228ENST00000495010 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
VARS-228ENST00000495010 NTF3P20783 257 aa8.85□□□□□ -0.99
VARS-228ENST00000495010 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
VARS-228ENST00000495010 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
VARS-228ENST00000495010 CENPWQ5EE01 88 aa8.84□□□□□ -0.99
VARS-228ENST00000495010 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
VARS-228ENST00000495010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.83□□□□□ -1
VARS-228ENST00000495010 IGKV2-29A2NJV5 120 aaPredicted RBP8.83□□□□□ -1
VARS-228ENST00000495010 FAM231BA6NCW3 169 aa8.83□□□□□ -1
VARS-228ENST00000495010 H7C423 109 aa8.83□□□□□ -1
VARS-228ENST00000495010 NCR2O95944 276 aa8.83□□□□□ -1
VARS-228ENST00000495010 APCSP02743 223 aa8.83□□□□□ -1
VARS-228ENST00000495010 XCL1P47992 114 aa8.83□□□□□ -1
VARS-228ENST00000495010 FOXI1Q12951 378 aa8.83□□□□□ -1
VARS-228ENST00000495010 BTF3L4Q96K17 158 aa8.83□□□□□ -1
VARS-228ENST00000495010 IGHV1-58A0A0C4DH39 117 aa8.82□□□□□ -1
VARS-228ENST00000495010 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
VARS-228ENST00000495010 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
VARS-228ENST00000495010 FGF6P10767 208 aa8.82□□□□□ -1
VARS-228ENST00000495010 GNG4P50150 75 aa8.82□□□□□ -1
VARS-228ENST00000495010 TWIST1Q15672 202 aa8.82□□□□□ -1
VARS-228ENST00000495010 TMEM101Q96IK0 257 aa8.82□□□□□ -1
VARS-228ENST00000495010 MANBALQ9NQG1 85 aa8.82□□□□□ -1
VARS-228ENST00000495010 BIN3Q9NQY0 253 aa8.82□□□□□ -1
VARS-228ENST00000495010 Q6ZNX1 250 aa8.81□□□□□ -1
VARS-228ENST00000495010 GATD1Q8NB37 220 aa8.81□□□□□ -1
VARS-228ENST00000495010 OR5A1Q8NGJ0 315 aa8.81□□□□□ -1
VARS-228ENST00000495010 C11orf52Q96A22 123 aa8.81□□□□□ -1
VARS-228ENST00000495010 SMIM12Q96EX1 92 aa8.81□□□□□ -1
VARS-228ENST00000495010 LINC00526Q96FQ7 95 aa8.81□□□□□ -1
VARS-228ENST00000495010 GNG13Q9P2W3 67 aa8.81□□□□□ -1
VARS-228ENST00000495010 TRAV26-2A0A0B4J265 109 aa8.8□□□□□ -1
VARS-228ENST00000495010 G3V3Q6 166 aa8.8□□□□□ -1
VARS-228ENST00000495010 CCL25O15444 150 aa8.8□□□□□ -1
VARS-228ENST00000495010 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
VARS-228ENST00000495010 SYCNQ0VAF6 134 aa8.8□□□□□ -1
VARS-228ENST00000495010 SMIM15Q7Z3B0 74 aa8.8□□□□□ -1
VARS-228ENST00000495010 RAB19A4D1S5 217 aa8.79□□□□□ -1
VARS-228ENST00000495010 CCL20P78556 96 aa8.79□□□□□ -1
VARS-228ENST00000495010 GAGE2BQ13066 116 aa8.79□□□□□ -1
VARS-228ENST00000495010 SS18Q15532 418 aa8.79□□□□□ -1
VARS-228ENST00000495010 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
VARS-228ENST00000495010 ISOC2Q96AB3 205 aa8.79□□□□□ -1
VARS-228ENST00000495010 LOC107984640A0A0U1RRK4 108 aa8.78□□□□□ -1
VARS-228ENST00000495010 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
VARS-228ENST00000495010 KANTRA0A1W2PQU2 76 aa8.78□□□□□ -1
VARS-228ENST00000495010 MT-ND6P03923 174 aa8.78□□□□□ -1
VARS-228ENST00000495010 PMCHP20382 165 aa8.78□□□□□ -1
VARS-228ENST00000495010 PTTG1IPP53801 180 aa8.78□□□□□ -1
VARS-228ENST00000495010 EIF5AP63241 154 aaKnown RBP8.78□□□□□ -1
VARS-228ENST00000495010 ZNF345Q14585 488 aa8.78□□□□□ -1
VARS-228ENST00000495010 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
VARS-228ENST00000495010 RPL39LQ96EH5 51 aaKnown RBP8.78□□□□□ -1
VARS-228ENST00000495010 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
VARS-228ENST00000495010 SMLR1H3BR10 107 aa8.77□□□□□ -1.01
VARS-228ENST00000495010 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
VARS-228ENST00000495010 CTRLP40313 264 aa8.77□□□□□ -1.01
VARS-228ENST00000495010 TEX261Q6UWH6 196 aa8.77□□□□□ -1.01
VARS-228ENST00000495010 I3L3M4 83 aa8.76□□□□□ -1.01
VARS-228ENST00000495010 CAMPP49913 170 aa8.76□□□□□ -1.01
VARS-228ENST00000495010 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
VARS-228ENST00000495010 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
VARS-228ENST00000495010 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
VARS-228ENST00000495010 MED9Q9NWA0 146 aa8.76□□□□□ -1.01
VARS-228ENST00000495010 PDE6DO43924 150 aa8.75□□□□□ -1.01
VARS-228ENST00000495010 MALP21145 153 aa8.75□□□□□ -1.01
VARS-228ENST00000495010 CD164L2Q6UWJ8 174 aa8.75□□□□□ -1.01
VARS-228ENST00000495010 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
VARS-228ENST00000495010 BCL2L11O43521 198 aa8.74□□□□□ -1.01
VARS-228ENST00000495010 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
VARS-228ENST00000495010 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms