RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
ERCC3-209ENST00000494464 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 M0R2P5 195 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 PPP1R17O96001 155 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 KRTDAPP60985 99 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 PIK3CD-AS1Q5SR53 167 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 TEX43Q6ZNM6 134 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 Q8N976 141 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 PTH2Q96A98 100 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 HSPB8Q9UJY1 196 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 HHLA3Q9XRX5 114 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 HERC2O95714 4834 aa9.09□□□□□ -0.95
ERCC3-209ENST00000494464 TRGV4A0A0C4DH28 118 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 C14orf178Q8N769 122 aaPredicted RBP9.08□□□□□ -0.96
ERCC3-209ENST00000494464 Q8N8P6 123 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
ERCC3-209ENST00000494464 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
ERCC3-209ENST00000494464 LINC00315P59091 139 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 PMCHL1Q16048 86 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
ERCC3-209ENST00000494464 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 KRTAP1-5Q9BYS1 174 aa9.07□□□□□ -0.96
ERCC3-209ENST00000494464 A0A096LNJ9 63 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 HBDP02042 147 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 MGPP08493 103 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 GATA1P15976 413 aaPredicted RBP9.06□□□□□ -0.96
ERCC3-209ENST00000494464 PKIAP61925 76 aa9.06□□□□□ -0.96
ERCC3-209ENST00000494464 K7EMI3 77 aa9.05□□□□□ -0.96
ERCC3-209ENST00000494464 K7EQD1 137 aa9.05□□□□□ -0.96
ERCC3-209ENST00000494464 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
ERCC3-209ENST00000494464 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
ERCC3-209ENST00000494464 OR4C5Q8NGB2 326 aa9.05□□□□□ -0.96
ERCC3-209ENST00000494464 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
ERCC3-209ENST00000494464 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 C20orf202A1L168 122 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 SIVA1O15304 175 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
ERCC3-209ENST00000494464 TNP2Q05952 138 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
ERCC3-209ENST00000494464 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 CIDEAO60543 219 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 GYPEP15421 78 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
ERCC3-209ENST00000494464 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 CRYGDP07320 174 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 FCER1GP30273 86 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 SUMO4Q6EEV6 95 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 LINC00173Q6ZV60 143 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 VAMP8Q9BV40 100 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 JPT2Q9H910 190 aa9.02□□□□□ -0.97
ERCC3-209ENST00000494464 A0A087WWL8 130 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 A8MWV9 139 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 RS1O15537 224 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 LAGE3Q14657 143 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 CFAP126Q5VTH2 177 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 SH2D6Q7Z4S9 175 aa9.01□□□□□ -0.97
ERCC3-209ENST00000494464 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
ERCC3-209ENST00000494464 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
ERCC3-209ENST00000494464 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 K7EP13 123 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 RHODO00212 210 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 TIRAPP58753 221 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 RHOHQ15669 191 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 ZNF56Q15929 161 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 FAM74A4Q5TZK3 123 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 LOC100131303A0A0U1RQF7 123 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 F5H697 171 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 H7C1H1 209 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 M0QY20 66 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
ERCC3-209ENST00000494464 SLC25A29Q8N8R3 303 aa8.99□□□□□ -0.97
ERCC3-209ENST00000494464 POLR2KP53803 58 aaKnown RBP8.98□□□□□ -0.97
ERCC3-209ENST00000494464 ZFP2Q6ZN57 461 aa8.98□□□□□ -0.97
ERCC3-209ENST00000494464 WFDC10BQ8IUB3 73 aa8.98□□□□□ -0.97
ERCC3-209ENST00000494464 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
ERCC3-209ENST00000494464 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
ERCC3-209ENST00000494464 PRO1933Q9H354 126 aa8.98□□□□□ -0.97
ERCC3-209ENST00000494464 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 LINC00587B1AMM8 73 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 VCYO14598 125 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 TCAPO15273 167 aa8.97□□□□□ -0.97
ERCC3-209ENST00000494464 ATP5LO75964 103 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms