RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 KRTAP10-4P60372 401 aaPredicted RBP15.3■□□□□ 0.04
RHBDD3-206ENST00000493894 COTL1Q14019 142 aa15.3■□□□□ 0.04
RHBDD3-206ENST00000493894 CLRN3Q8NCR9 226 aa15.3■□□□□ 0.04
RHBDD3-206ENST00000493894 RNASE7Q9H1E1 156 aaKnown RBP15.3■□□□□ 0.04
RHBDD3-206ENST00000493894 IGLV4-60A0A075B6I1 120 aa15.29■□□□□ 0.04
RHBDD3-206ENST00000493894 K7EN84 100 aa15.29■□□□□ 0.04
RHBDD3-206ENST00000493894 OCC1Q8TAD7 63 aa15.27■□□□□ 0.04
RHBDD3-206ENST00000493894 GFRA4Q9GZZ7 299 aa15.27■□□□□ 0.04
RHBDD3-206ENST00000493894 SMIM15Q7Z3B0 74 aa15.26■□□□□ 0.03
RHBDD3-206ENST00000493894 TRAV26-2A0A0B4J265 109 aa15.25■□□□□ 0.03
RHBDD3-206ENST00000493894 hDV102S1A0JD36 115 aa15.25■□□□□ 0.03
RHBDD3-206ENST00000493894 GATD1Q8NB37 220 aa15.25■□□□□ 0.03
RHBDD3-206ENST00000493894 TMEM250H0YL14 139 aa15.24■□□□□ 0.03
RHBDD3-206ENST00000493894 CNBPP62633 177 aaKnown RBP15.24■□□□□ 0.03
RHBDD3-206ENST00000493894 AKAP14Q86UN6 197 aa15.24■□□□□ 0.03
RHBDD3-206ENST00000493894 RPL37AP61513 92 aaKnown RBP15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 BLOC1S1P78537 153 aa15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 ALKAL2Q6UX46 152 aa15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 Q6ZNX1 250 aa15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 GTSF1Q8WW33 167 aa15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.23■□□□□ 0.03
RHBDD3-206ENST00000493894 AP5S1Q9NUS5 200 aa15.22■□□□□ 0.03
RHBDD3-206ENST00000493894 GATCO43716 136 aaKnown RBP15.21■□□□□ 0.03
RHBDD3-206ENST00000493894 SDIM1Q6ZPB5 146 aa15.21■□□□□ 0.03
RHBDD3-206ENST00000493894 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.2■□□□□ 0.02
RHBDD3-206ENST00000493894 NCR2O95944 276 aa15.2■□□□□ 0.02
RHBDD3-206ENST00000493894 TEX261Q6UWH6 196 aa15.2■□□□□ 0.02
RHBDD3-206ENST00000493894 FAM231DQ6ZW35 169 aa15.2■□□□□ 0.02
RHBDD3-206ENST00000493894 RPL39LQ96EH5 51 aaKnown RBP15.2■□□□□ 0.02
RHBDD3-206ENST00000493894 APCSP02743 223 aa15.19■□□□□ 0.02
RHBDD3-206ENST00000493894 AMMECR1LQ6DCA0 310 aa15.19■□□□□ 0.02
RHBDD3-206ENST00000493894 IGHV3-64A0A075B6Q5 118 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 IGKV3OR2-268A0A0C4DH90 116 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 A8MWL6 223 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 PANO1I0J062 215 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 OXTP01178 125 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 CEBPGP53567 150 aa15.18■□□□□ 0.02
RHBDD3-206ENST00000493894 PKHD1L1Q86WI1 4243 aa15.17■□□□□ 0.02
RHBDD3-206ENST00000493894 FOXA3P55318 350 aaPredicted RBP15.17■□□□□ 0.02
RHBDD3-206ENST00000493894 CT83Q5H943 113 aa15.17■□□□□ 0.02
RHBDD3-206ENST00000493894 LYPD6BQ8NI32 183 aa15.17■□□□□ 0.02
RHBDD3-206ENST00000493894 BORCS7Q96B45 105 aa15.17■□□□□ 0.02
RHBDD3-206ENST00000493894 hCG_2014768A0A024R1R8 64 aa15.16■□□□□ 0.02
RHBDD3-206ENST00000493894 GAGE12HA6NDE8 117 aa15.16■□□□□ 0.02
RHBDD3-206ENST00000493894 SDHAF1A6NFY7 115 aa15.16■□□□□ 0.02
RHBDD3-206ENST00000493894 LRP1Q07954 4544 aaKnown RBP15.16■□□□□ 0.02
RHBDD3-206ENST00000493894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.15■□□□□ 0.02
RHBDD3-206ENST00000493894 IGKV2-29A2NJV5 120 aaPredicted RBP15.15■□□□□ 0.02
RHBDD3-206ENST00000493894 H7C423 109 aa15.15■□□□□ 0.02
RHBDD3-206ENST00000493894 CIRBPQ14011 172 aaKnown RBP15.15■□□□□ 0.02
RHBDD3-206ENST00000493894 RNASEKQ6P5S7 137 aaKnown RBP15.15■□□□□ 0.02
RHBDD3-206ENST00000493894 FAT3Q8TDW7 4589 aa15.14■□□□□ 0.01
RHBDD3-206ENST00000493894 CFAP161Q6P656 301 aa15.14■□□□□ 0.01
RHBDD3-206ENST00000493894 C15orf56Q8N910 161 aa15.14■□□□□ 0.01
RHBDD3-206ENST00000493894 FGF6P10767 208 aa15.13■□□□□ 0.01
RHBDD3-206ENST00000493894 SMIM7Q9BQ49 75 aa15.13■□□□□ 0.01
RHBDD3-206ENST00000493894 EIF5A2Q9GZV4 153 aaKnown RBP15.13■□□□□ 0.01
RHBDD3-206ENST00000493894 SLPIP03973 132 aa15.12■□□□□ 0.01
RHBDD3-206ENST00000493894 CHCHD10Q8WYQ3 142 aaPredicted RBP15.12■□□□□ 0.01
RHBDD3-206ENST00000493894 TRBV6-5A0A0K0K1A5 114 aa15.11■□□□□ 0.01
RHBDD3-206ENST00000493894 I3L3M4 83 aa15.11■□□□□ 0.01
RHBDD3-206ENST00000493894 ZNF25P17030 456 aaPredicted RBP15.11■□□□□ 0.01
RHBDD3-206ENST00000493894 PMCHP20382 165 aa15.11■□□□□ 0.01
RHBDD3-206ENST00000493894 HNRNPA3P51991 378 aaKnown RBP15.1■□□□□ 0.01
RHBDD3-206ENST00000493894 LINC01551Q86U37 167 aa15.1■□□□□ 0.01
RHBDD3-206ENST00000493894 DPH3Q96FX2 82 aa15.1■□□□□ 0.01
RHBDD3-206ENST00000493894 RNF185Q96GF1 192 aa15.1■□□□□ 0.01
RHBDD3-206ENST00000493894 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 CHTF8P0CG12 524 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 HIGD2BQ4VC39 106 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 SPACA4Q8TDM5 124 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 TSKUQ8WUA8 353 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
RHBDD3-206ENST00000493894 A0A1B0GUT8 65 aa15.08■□□□□ 0
RHBDD3-206ENST00000493894 NDUFS6O75380 124 aaKnown RBP15.08■□□□□ 0
RHBDD3-206ENST00000493894 SERTAD4-AS1Q5TG53 156 aa15.08■□□□□ 0
RHBDD3-206ENST00000493894 TMEM101Q96IK0 257 aa15.08■□□□□ 0
RHBDD3-206ENST00000493894 ST20Q9HBF5 79 aa15.08■□□□□ 0
RHBDD3-206ENST00000493894 A0A087WYN8 130 aa15.07■□□□□ 0
RHBDD3-206ENST00000493894 ZNF727A8MUV8 499 aa15.07■□□□□ 0
RHBDD3-206ENST00000493894 OR5A1Q8NGJ0 315 aa15.07■□□□□ 0
RHBDD3-206ENST00000493894 FAM210AQ96ND0 272 aa15.07■□□□□ 0
RHBDD3-206ENST00000493894 TMEM191AQ9H0A3 160 aa15.07■□□□□ 0
RHBDD3-206ENST00000493894 FAM231BA6NCW3 169 aa15.06■□□□□ 0
RHBDD3-206ENST00000493894 RPS10P46783 165 aaKnown RBP15.06■□□□□ 0
RHBDD3-206ENST00000493894 MRAP2Q96G30 205 aa15.06■□□□□ 0
RHBDD3-206ENST00000493894 OSTCQ9NRP0 149 aa15.06■□□□□ 0
RHBDD3-206ENST00000493894 TMEM242Q9NWH2 141 aa15.06■□□□□ 0
RHBDD3-206ENST00000493894 GVQW2A0A096LPI5 108 aaPredicted RBP15.05■□□□□ -0
RHBDD3-206ENST00000493894 GAS8-AS1O95177 125 aa15.05■□□□□ -0
RHBDD3-206ENST00000493894 TSHBP01222 138 aa15.05■□□□□ -0
RHBDD3-206ENST00000493894 ESDP10768 282 aa15.04■□□□□ -0
RHBDD3-206ENST00000493894 HMCN2Q8NDA2 5059 aa15.04■□□□□ -0
RHBDD3-206ENST00000493894 SRP19P09132 144 aaKnown RBP15.03■□□□□ -0
RHBDD3-206ENST00000493894 COX6A2Q02221 97 aa15.03■□□□□ -0
RHBDD3-206ENST00000493894 FOXI1Q12951 378 aa15.03■□□□□ -0
RHBDD3-206ENST00000493894 XCL1P47992 114 aa15.02■□□□□ -0
RHBDD3-206ENST00000493894 AMN1Q8IY45 258 aa15.02■□□□□ -0
RHBDD3-206ENST00000493894 TRBV27A0A0K0K1C4 114 aa15.01□□□□□ -0.01
RHBDD3-206ENST00000493894 RAB4AP20338 218 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms