RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 BUB3O43684 328 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 CNFNQ9BYD5 112 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 APC2O95996 2303 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 CSMD1Q96PZ7 3565 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 MIAQ16674 131 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 AMELXQ99217 191 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 CACNA1BQ00975 2339 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 CNOT1A5YKK6 2376 aaKnown RBP5.1□□□□□ -1.59
VPS13B-205ENST00000493587 IGKV1D-17A0A075B6S4 117 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV1-69DA0A0B4J2H0 117 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 IGKV3-15P01624 115 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 PDE6HQ13956 83 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 BUB1B-PAK6H3BSN5 160 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 PPP1R17O96001 155 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 LYPD5Q6UWN5 251 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 SPTBN1Q01082 2364 aaKnown RBP5.09□□□□□ -1.59
VPS13B-205ENST00000493587 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV1-2P23083 117 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 RNF7Q9UBF6 113 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 LAMTOR3Q9UHA4 124 aa5.09□□□□□ -1.59
VPS13B-205ENST00000493587 C17orf58Q2M2W7 97 aa5.09□□□□□ -1.6
VPS13B-205ENST00000493587 ZNF876PQ49A33 203 aa5.09□□□□□ -1.6
VPS13B-205ENST00000493587 FAM74A4Q5TZK3 123 aa5.09□□□□□ -1.6
VPS13B-205ENST00000493587 C9orf106Q8NAJ2 232 aa5.09□□□□□ -1.6
VPS13B-205ENST00000493587 RIF1Q5UIP0 2472 aaKnown RBP5.08□□□□□ -1.6
VPS13B-205ENST00000493587 PLAC8L1A1L4L8 177 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 TSHBP01222 138 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 IGKV1-17P01599 117 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 BLCAPP62952 87 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 ABCA4P78363 2273 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 MALRD1Q5VYJ5 2156 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV3OR16-13A0A075B7E8 117 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV3-74A0A0B4J1X5 117 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 LRCOL1A6NCL2 159 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 MSMPQ1L6U9 139 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 DEFB109BQ30KR1 87 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 FAM215AQ9Y5M1 114 aa5.08□□□□□ -1.6
VPS13B-205ENST00000493587 VCYO14598 125 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 PVRIGQ6DKI7 326 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 ZNF491Q8N8L2 437 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 Q8NA96 180 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 NBPF19A0A087WUL8 3843 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 TRBV27A0A0K0K1C4 114 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 PRAC2D3DTV9 90 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 NCR3O14931 201 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 ADORA2A-AS1P86434 159 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
VPS13B-205ENST00000493587 TIMM17AQ99595 171 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 CCL13Q99616 98 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 UBL5Q9BZL1 73 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 SVEP1Q4LDE5 3571 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV3-66A0A0C4DH42 116 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 IGIPA6NJ69 53 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 H3BS24 57 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 SPRY3O43610 288 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV3-23P01764 117 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 PSMG3-AS1Q96PY0 264 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
VPS13B-205ENST00000493587 CD28P10747 220 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 HAMPP81172 84 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 RNASE13Q5GAN3 156 aaKnown RBP5.06□□□□□ -1.6
VPS13B-205ENST00000493587 C22orf34Q6ZV56 151 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 CEP295Q9C0D2 2601 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV1OR15-1A0A075B7D0 117 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 CGB3P0DN86 165 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 CGB7P0DN87 165 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 LINC00574Q9H8X3 128 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 LHBP01229 141 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 FAM222AQ5U5X8 452 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 Q9UF83 564 aa5.06□□□□□ -1.6
VPS13B-205ENST00000493587 AKAP6Q13023 2319 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 A0A087WWL8 130 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 EPM2AB3EWF7 344 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 PSPHP1O15172 72 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 APOC4P55056 127 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-205ENST00000493587 CFHR3Q02985 330 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 CLEC19AQ6UXS0 136 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 RBM12B-AS1Q9P1G2 102 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 PCNX1Q96RV3 2341 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV7-4-1A0A0J9YVY3 117 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 CCL3L1P16619 93 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 PIK3CD-AS1Q5SR53 167 aa5.05□□□□□ -1.6
VPS13B-205ENST00000493587 IGHV3-49A0A0A0MS15 119 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 A0A0J9YX75 114 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 ESRGQ1W209 222 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 PKDREJQ9NTG1 2253 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 SRRM5B3KS81 715 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 RPL11P62913 178 aaKnown RBP5.04□□□□□ -1.6
VPS13B-205ENST00000493587 FAM229BQ4G0N7 80 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 FAM218AQ96MZ4 157 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 NDUFC1O43677 76 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 CRPP02741 224 aa5.04□□□□□ -1.6
VPS13B-205ENST00000493587 Q8N2B8 174 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms