RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
COL6A1-205ENST00000492851 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
COL6A1-205ENST00000492851 AMTP48728 403 aa8.05□□□□□ -1.12
COL6A1-205ENST00000492851 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
COL6A1-205ENST00000492851 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
COL6A1-205ENST00000492851 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
COL6A1-205ENST00000492851 C20orf203Q8NBC4 194 aa8.05□□□□□ -1.12
COL6A1-205ENST00000492851 RPP21Q9H633 154 aaKnown RBP8.05□□□□□ -1.12
COL6A1-205ENST00000492851 IGLV10-54A0A075B6I4 117 aa8.04□□□□□ -1.12
COL6A1-205ENST00000492851 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
COL6A1-205ENST00000492851 NCR2O95944 276 aa8.04□□□□□ -1.12
COL6A1-205ENST00000492851 FAM210AQ96ND0 272 aa8.04□□□□□ -1.12
COL6A1-205ENST00000492851 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
COL6A1-205ENST00000492851 TMEM250H0YL14 139 aa8.03□□□□□ -1.12
COL6A1-205ENST00000492851 H7C423 109 aa8.03□□□□□ -1.12
COL6A1-205ENST00000492851 KRTAP10-4P60372 401 aaPredicted RBP8.03□□□□□ -1.12
COL6A1-205ENST00000492851 RPL37AP61513 92 aaKnown RBP8.03□□□□□ -1.12
COL6A1-205ENST00000492851 BLOC1S1P78537 153 aa8.03□□□□□ -1.12
COL6A1-205ENST00000492851 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
COL6A1-205ENST00000492851 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
COL6A1-205ENST00000492851 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
COL6A1-205ENST00000492851 IGHV3-64A0A075B6Q5 118 aa8.02□□□□□ -1.13
COL6A1-205ENST00000492851 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
COL6A1-205ENST00000492851 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
COL6A1-205ENST00000492851 RNASE7Q9H1E1 156 aaKnown RBP8.02□□□□□ -1.13
COL6A1-205ENST00000492851 A8MWL6 223 aa8.01□□□□□ -1.13
COL6A1-205ENST00000492851 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
COL6A1-205ENST00000492851 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
COL6A1-205ENST00000492851 GATD1Q8NB37 220 aa8.01□□□□□ -1.13
COL6A1-205ENST00000492851 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
COL6A1-205ENST00000492851 GATCO43716 136 aaKnown RBP8□□□□□ -1.13
COL6A1-205ENST00000492851 FOXA3P55318 350 aaPredicted RBP8□□□□□ -1.13
COL6A1-205ENST00000492851 K7EN84 100 aa7.99□□□□□ -1.13
COL6A1-205ENST00000492851 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
COL6A1-205ENST00000492851 APCSP02743 223 aa7.99□□□□□ -1.13
COL6A1-205ENST00000492851 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
COL6A1-205ENST00000492851 CT83Q5H943 113 aa7.99□□□□□ -1.13
COL6A1-205ENST00000492851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
COL6A1-205ENST00000492851 I3L3M4 83 aa7.98□□□□□ -1.13
COL6A1-205ENST00000492851 ZNF25P17030 456 aaPredicted RBP7.98□□□□□ -1.13
COL6A1-205ENST00000492851 AKAP14Q86UN6 197 aa7.98□□□□□ -1.13
COL6A1-205ENST00000492851 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
COL6A1-205ENST00000492851 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
COL6A1-205ENST00000492851 BTF3L4Q96K17 158 aa7.98□□□□□ -1.13
COL6A1-205ENST00000492851 TRAV26-2A0A0B4J265 109 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 TRBV6-5A0A0K0K1A5 114 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 FAM231BA6NCW3 169 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 GAGE12HA6NDE8 117 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 SDHAF1A6NFY7 115 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 PMCHP20382 165 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
COL6A1-205ENST00000492851 Q6ZNX1 250 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 LYPD6BQ8NI32 183 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 GFRA4Q9GZZ7 299 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
COL6A1-205ENST00000492851 FGF6P10767 208 aa7.96□□□□□ -1.14
COL6A1-205ENST00000492851 RPS10P46783 165 aaKnown RBP7.96□□□□□ -1.14
COL6A1-205ENST00000492851 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 SLPIP03973 132 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 ALKAL2Q6UX46 152 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 Q6ZRU5 148 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 OR5A1Q8NGJ0 315 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
COL6A1-205ENST00000492851 RPL39LQ96EH5 51 aaKnown RBP7.95□□□□□ -1.14
COL6A1-205ENST00000492851 EIF5A2Q9GZV4 153 aaKnown RBP7.95□□□□□ -1.14
COL6A1-205ENST00000492851 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
COL6A1-205ENST00000492851 A0A087WYN8 130 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 A0A1B0GUT8 65 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 PANO1I0J062 215 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 PPP1R17O96001 155 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 CEBPGP53567 150 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
COL6A1-205ENST00000492851 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.93□□□□□ -1.14
COL6A1-205ENST00000492851 GVQW2A0A096LPI5 108 aaPredicted RBP7.93□□□□□ -1.14
COL6A1-205ENST00000492851 IGKV2-29A2NJV5 120 aaPredicted RBP7.93□□□□□ -1.14
COL6A1-205ENST00000492851 ZNF727A8MUV8 499 aa7.93□□□□□ -1.14
COL6A1-205ENST00000492851 SMIM7Q9BQ49 75 aa7.93□□□□□ -1.14
COL6A1-205ENST00000492851 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
COL6A1-205ENST00000492851 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
COL6A1-205ENST00000492851 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
COL6A1-205ENST00000492851 ESDP10768 282 aa7.92□□□□□ -1.14
COL6A1-205ENST00000492851 COX6A2Q02221 97 aa7.92□□□□□ -1.14
COL6A1-205ENST00000492851 SS18Q15532 418 aa7.92□□□□□ -1.14
COL6A1-205ENST00000492851 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
COL6A1-205ENST00000492851 IGHV1-58A0A0C4DH39 117 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 TRBV27A0A0K0K1C4 114 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 VCYO14598 125 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 CCL25O15444 150 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 RIGQ13278 110 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 FAM74A3Q4VXF1 159 aa7.91□□□□□ -1.14
COL6A1-205ENST00000492851 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
COL6A1-205ENST00000492851 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
COL6A1-205ENST00000492851 RAB4AP20338 218 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms