RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
CACNA1C-228ENST00000492150 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
CACNA1C-228ENST00000492150 H7C1H1 209 aa7.21□□□□□ -1.26
CACNA1C-228ENST00000492150 PGLYRP4Q96LB8 373 aa7.21□□□□□ -1.26
CACNA1C-228ENST00000492150 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
CACNA1C-228ENST00000492150 IGLC6P0CF74 106 aa7.2□□□□□ -1.26
CACNA1C-228ENST00000492150 RASL11AQ6T310 242 aa7.2□□□□□ -1.26
CACNA1C-228ENST00000492150 MED28Q9H204 178 aa7.2□□□□□ -1.26
CACNA1C-228ENST00000492150 FXYD6-FXYD2A0A087WZ82 144 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 UBE2L6O14933 153 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 GIPP09681 153 aaPredicted RBP7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 Q6ZRP5 223 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 NIT2Q9NQR4 276 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 CYTL1Q9NRR1 136 aa7.19□□□□□ -1.26
CACNA1C-228ENST00000492150 AMTP48728 403 aa7.18□□□□□ -1.26
CACNA1C-228ENST00000492150 COTL1Q14019 142 aa7.18□□□□□ -1.26
CACNA1C-228ENST00000492150 FER1L6-AS1Q8NA97 138 aa7.18□□□□□ -1.26
CACNA1C-228ENST00000492150 FOXI1Q12951 378 aa7.17□□□□□ -1.26
CACNA1C-228ENST00000492150 TMUB2Q71RG4 321 aa7.17□□□□□ -1.26
CACNA1C-228ENST00000492150 TPPP3Q9BW30 176 aa7.17□□□□□ -1.26
CACNA1C-228ENST00000492150 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
CACNA1C-228ENST00000492150 CACNG7P62955 275 aa7.16□□□□□ -1.26
CACNA1C-228ENST00000492150 SFT2D1Q8WV19 159 aa7.16□□□□□ -1.26
CACNA1C-228ENST00000492150 MBD3L1Q8WWY6 194 aa7.16□□□□□ -1.26
CACNA1C-228ENST00000492150 LINC00526Q96FQ7 95 aa7.16□□□□□ -1.26
CACNA1C-228ENST00000492150 A0A1B0GV50 99 aa7.15□□□□□ -1.26
CACNA1C-228ENST00000492150 G3V3Q6 166 aa7.15□□□□□ -1.26
CACNA1C-228ENST00000492150 PFDN1O60925 122 aa7.15□□□□□ -1.26
CACNA1C-228ENST00000492150 RPL35P42766 123 aaKnown RBP7.15□□□□□ -1.26
CACNA1C-228ENST00000492150 OR2D3Q8NGH3 330 aa7.15□□□□□ -1.26
CACNA1C-228ENST00000492150 C19orf71A6NCJ1 209 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 NTF3P20783 257 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 RPS20P60866 119 aaKnown RBP7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 LYZL1Q6UWQ5 148 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 Q6ZNX1 250 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 CARD19Q96LW7 228 aa7.14□□□□□ -1.27
CACNA1C-228ENST00000492150 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 F2Z2F3 143 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 AMMECR1LQ6DCA0 310 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 FAM213BQ8TBF2 198 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 PKIGQ9Y2B9 76 aa7.13□□□□□ -1.27
CACNA1C-228ENST00000492150 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 FGF6P10767 208 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 XCL1P47992 114 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 PRR4Q16378 134 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 KCNRGQ8N5I3 272 aa7.12□□□□□ -1.27
CACNA1C-228ENST00000492150 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 A0A1W2PNN7 141 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 H7C423 109 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 CCL25O15444 150 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 ARPC5O15511 151 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 CENPWQ5EE01 88 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 C11orf52Q96A22 123 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
CACNA1C-228ENST00000492150 LINC00959A0A1B0GUT2 108 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 NCR2O95944 276 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 IFNA1P01562 189 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 CCL20P78556 96 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 ZNF664Q8N3J9 261 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 C9orf62Q8N4C0 152 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 RPL39LQ96EH5 51 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-228ENST00000492150 XKRY2A2RUG3 117 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 UMAD1C9J7I0 102 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 APCSP02743 223 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 H2AFB1P0C5Y9 115 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 CTRLP40313 264 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
CACNA1C-228ENST00000492150 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 MT-ND6P03923 174 aa7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 TWIST1Q15672 202 aa7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 CNFNQ9BYD5 112 aa7.08□□□□□ -1.28
CACNA1C-228ENST00000492150 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 SDHAF1A6NFY7 115 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 BCL2P10415 239 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 CAMPP49913 170 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 GNG4P50150 75 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 FOXA3P55318 350 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 C1orf137Q5JT78 98 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 CD164L2Q6UWJ8 174 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 SMIM12Q96EX1 92 aa7.07□□□□□ -1.28
CACNA1C-228ENST00000492150 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 SMLR1H3BR10 107 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms