RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
SREBF1-216ENST00000490796 LRP1Q07954 4544 aaKnown RBP12.69□□□□□ -0.38
SREBF1-216ENST00000490796 TAGLN2P37802 199 aaKnown RBP12.68□□□□□ -0.38
SREBF1-216ENST00000490796 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
SREBF1-216ENST00000490796 C9orf62Q8N4C0 152 aa12.68□□□□□ -0.38
SREBF1-216ENST00000490796 NUDT10Q8NFP7 164 aa12.68□□□□□ -0.38
SREBF1-216ENST00000490796 NUDT11Q96G61 164 aa12.68□□□□□ -0.38
SREBF1-216ENST00000490796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-216ENST00000490796 TRBV20OR9-2A0A075B6H5 130 aa12.67□□□□□ -0.38
SREBF1-216ENST00000490796 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
SREBF1-216ENST00000490796 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
SREBF1-216ENST00000490796 SDIM1Q6ZPB5 146 aa12.67□□□□□ -0.38
SREBF1-216ENST00000490796 CTRLP40313 264 aa12.66□□□□□ -0.38
SREBF1-216ENST00000490796 SLC51BQ86UW2 128 aa12.66□□□□□ -0.38
SREBF1-216ENST00000490796 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
SREBF1-216ENST00000490796 IGKV3OR2-268A0A0C4DH90 116 aa12.65□□□□□ -0.38
SREBF1-216ENST00000490796 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
SREBF1-216ENST00000490796 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
SREBF1-216ENST00000490796 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
SREBF1-216ENST00000490796 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
SREBF1-216ENST00000490796 FAT3Q8TDW7 4589 aa12.63□□□□□ -0.39
SREBF1-216ENST00000490796 PANO1I0J062 215 aa12.63□□□□□ -0.39
SREBF1-216ENST00000490796 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
SREBF1-216ENST00000490796 GAGE12HA6NDE8 117 aa12.62□□□□□ -0.39
SREBF1-216ENST00000490796 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
SREBF1-216ENST00000490796 GATD1Q8NB37 220 aa12.62□□□□□ -0.39
SREBF1-216ENST00000490796 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
SREBF1-216ENST00000490796 RNASEKQ6P5S7 137 aaKnown RBP12.61□□□□□ -0.39
SREBF1-216ENST00000490796 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
SREBF1-216ENST00000490796 RNF185Q96GF1 192 aa12.61□□□□□ -0.39
SREBF1-216ENST00000490796 NCR2O95944 276 aa12.6□□□□□ -0.39
SREBF1-216ENST00000490796 APCSP02743 223 aa12.6□□□□□ -0.39
SREBF1-216ENST00000490796 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
SREBF1-216ENST00000490796 K7EN84 100 aa12.59□□□□□ -0.39
SREBF1-216ENST00000490796 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
SREBF1-216ENST00000490796 HNRNPA3P51991 378 aaKnown RBP12.59□□□□□ -0.39
SREBF1-216ENST00000490796 PLA2G2DQ9UNK4 145 aa12.59□□□□□ -0.39
SREBF1-216ENST00000490796 PKHD1L1Q86WI1 4243 aa12.58□□□□□ -0.39
SREBF1-216ENST00000490796 CIRBPQ14011 172 aaKnown RBP12.58□□□□□ -0.4
SREBF1-216ENST00000490796 RPL39LQ96EH5 51 aaKnown RBP12.58□□□□□ -0.4
SREBF1-216ENST00000490796 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-216ENST00000490796 A0A087WYN8 130 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-216ENST00000490796 H7C423 109 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 SLPIP03973 132 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 CHTF8P0CG12 524 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 Q6ZNX1 250 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 CHCHD10Q8WYQ3 142 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-216ENST00000490796 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
SREBF1-216ENST00000490796 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 A8MWL6 223 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 PMCHP20382 165 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 RPS10P46783 165 aaKnown RBP12.56□□□□□ -0.4
SREBF1-216ENST00000490796 CEBPGP53567 150 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 C7orf33Q8WU49 177 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
SREBF1-216ENST00000490796 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 FGF6P10767 208 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 BLOC1S1P78537 153 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 C15orf56Q8N910 161 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 SPACA4Q8TDM5 124 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 TMEM101Q96IK0 257 aa12.55□□□□□ -0.4
SREBF1-216ENST00000490796 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-216ENST00000490796 Q6ZRU5 148 aa12.54□□□□□ -0.4
SREBF1-216ENST00000490796 HMCN2Q8NDA2 5059 aa12.54□□□□□ -0.4
SREBF1-216ENST00000490796 I3L3M4 83 aa12.53□□□□□ -0.4
SREBF1-216ENST00000490796 COX6A2Q02221 97 aa12.53□□□□□ -0.4
SREBF1-216ENST00000490796 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.41
SREBF1-216ENST00000490796 ZNF25P17030 456 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-216ENST00000490796 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.41
SREBF1-216ENST00000490796 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
SREBF1-216ENST00000490796 MAJINQ3KP22 176 aa12.51□□□□□ -0.41
SREBF1-216ENST00000490796 ALKAL2Q6UX46 152 aa12.51□□□□□ -0.41
SREBF1-216ENST00000490796 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
SREBF1-216ENST00000490796 PLAC8Q9NZF1 115 aa12.51□□□□□ -0.41
SREBF1-216ENST00000490796 XCL1P47992 114 aa12.5□□□□□ -0.41
SREBF1-216ENST00000490796 CT83Q5H943 113 aa12.5□□□□□ -0.41
SREBF1-216ENST00000490796 OR5A1Q8NGJ0 315 aa12.5□□□□□ -0.41
SREBF1-216ENST00000490796 GVQW2A0A096LPI5 108 aaPredicted RBP12.49□□□□□ -0.41
SREBF1-216ENST00000490796 PHOX2AO14813 284 aa12.49□□□□□ -0.41
SREBF1-216ENST00000490796 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
SREBF1-216ENST00000490796 PRSS3P2Q8NHM4 247 aa12.49□□□□□ -0.41
SREBF1-216ENST00000490796 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
SREBF1-216ENST00000490796 PKIGQ9Y2B9 76 aa12.49□□□□□ -0.41
SREBF1-216ENST00000490796 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
SREBF1-216ENST00000490796 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
SREBF1-216ENST00000490796 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 FOXI1Q12951 378 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 SS18Q15532 418 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 STPG4Q8N801 248 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 FAM210AQ96ND0 272 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 TMEM242Q9NWH2 141 aa12.47□□□□□ -0.41
SREBF1-216ENST00000490796 CCL25O15444 150 aa12.46□□□□□ -0.41
SREBF1-216ENST00000490796 IGHV1-58A0A0C4DH39 117 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 LINC00959A0A1B0GUT2 108 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
SREBF1-216ENST00000490796 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 1169.7 ms