RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 DEFB104AQ8WTQ1 72 aa17.96■□□□□ 0.47
HOXB3-211ENST00000490677 TMEM243Q9BU79 118 aa17.96■□□□□ 0.47
HOXB3-211ENST00000490677 C9orf163Q8N9P6 203 aa17.94■□□□□ 0.46
HOXB3-211ENST00000490677 GATD1Q8NB37 220 aa17.94■□□□□ 0.46
HOXB3-211ENST00000490677 IGLV10-54A0A075B6I4 117 aa17.93■□□□□ 0.46
HOXB3-211ENST00000490677 TWIST1Q15672 202 aa17.93■□□□□ 0.46
HOXB3-211ENST00000490677 DGAT2L7PQ6IED9 249 aa17.93■□□□□ 0.46
HOXB3-211ENST00000490677 ALKAL2Q6UX46 152 aa17.93■□□□□ 0.46
HOXB3-211ENST00000490677 TMEM250H0YL14 139 aa17.92■□□□□ 0.46
HOXB3-211ENST00000490677 AKAP14Q86UN6 197 aa17.92■□□□□ 0.46
HOXB3-211ENST00000490677 TRAV26-2A0A0B4J265 109 aa17.91■□□□□ 0.46
HOXB3-211ENST00000490677 KRTAP29-1A8MX34 341 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-211ENST00000490677 FOXA3P55318 350 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-211ENST00000490677 TRAV8-4A0A0B4J246 113 aa17.88■□□□□ 0.45
HOXB3-211ENST00000490677 PANO1I0J062 215 aa17.88■□□□□ 0.45
HOXB3-211ENST00000490677 BLOC1S1P78537 153 aa17.88■□□□□ 0.45
HOXB3-211ENST00000490677 COTL1Q14019 142 aa17.88■□□□□ 0.45
HOXB3-211ENST00000490677 FAM231DQ6ZW35 169 aa17.88■□□□□ 0.45
HOXB3-211ENST00000490677 RPL39LQ96EH5 51 aaKnown RBP17.88■□□□□ 0.45
HOXB3-211ENST00000490677 hCG_2014768A0A024R1R8 64 aa17.87■□□□□ 0.45
HOXB3-211ENST00000490677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.87■□□□□ 0.45
HOXB3-211ENST00000490677 AMTP48728 403 aa17.86■□□□□ 0.45
HOXB3-211ENST00000490677 SDIM1Q6ZPB5 146 aa17.86■□□□□ 0.45
HOXB3-211ENST00000490677 CLRN3Q8NCR9 226 aa17.86■□□□□ 0.45
HOXB3-211ENST00000490677 SLPIP03973 132 aa17.85■□□□□ 0.45
HOXB3-211ENST00000490677 CNBPP62633 177 aaKnown RBP17.85■□□□□ 0.45
HOXB3-211ENST00000490677 GATCO43716 136 aaKnown RBP17.84■□□□□ 0.45
HOXB3-211ENST00000490677 J3QL48 77 aa17.83■□□□□ 0.44
HOXB3-211ENST00000490677 UBE2L6O14933 153 aa17.81■□□□□ 0.44
HOXB3-211ENST00000490677 CT83Q5H943 113 aa17.81■□□□□ 0.44
HOXB3-211ENST00000490677 A8MWL6 223 aa17.8■□□□□ 0.44
HOXB3-211ENST00000490677 GAS8-AS1O95177 125 aa17.8■□□□□ 0.44
HOXB3-211ENST00000490677 CIRBPQ14011 172 aaKnown RBP17.8■□□□□ 0.44
HOXB3-211ENST00000490677 hDV102S1A0JD36 115 aa17.79■□□□□ 0.44
HOXB3-211ENST00000490677 NDUFS6O75380 124 aaKnown RBP17.79■□□□□ 0.44
HOXB3-211ENST00000490677 NCR2O95944 276 aa17.79■□□□□ 0.44
HOXB3-211ENST00000490677 LINC01551Q86U37 167 aa17.78■□□□□ 0.44
HOXB3-211ENST00000490677 C15orf56Q8N910 161 aa17.78■□□□□ 0.44
HOXB3-211ENST00000490677 FAM231BA6NCW3 169 aa17.77■□□□□ 0.44
HOXB3-211ENST00000490677 SDHAF1A6NFY7 115 aa17.77■□□□□ 0.44
HOXB3-211ENST00000490677 TEX261Q6UWH6 196 aa17.77■□□□□ 0.44
HOXB3-211ENST00000490677 TRBV6-5A0A0K0K1A5 114 aa17.76■□□□□ 0.43
HOXB3-211ENST00000490677 HNRNPA3P51991 378 aaKnown RBP17.76■□□□□ 0.43
HOXB3-211ENST00000490677 CEBPGP53567 150 aa17.76■□□□□ 0.43
HOXB3-211ENST00000490677 SMIM15Q7Z3B0 74 aa17.76■□□□□ 0.43
HOXB3-211ENST00000490677 FAM210AQ96ND0 272 aa17.76■□□□□ 0.43
HOXB3-211ENST00000490677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-211ENST00000490677 IGKV2-29A2NJV5 120 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-211ENST00000490677 SMIM7Q9BQ49 75 aa17.75■□□□□ 0.43
HOXB3-211ENST00000490677 H7C423 109 aa17.74■□□□□ 0.43
HOXB3-211ENST00000490677 SRP19P09132 144 aaKnown RBP17.74■□□□□ 0.43
HOXB3-211ENST00000490677 GAGE12HA6NDE8 117 aa17.73■□□□□ 0.43
HOXB3-211ENST00000490677 APCSP02743 223 aa17.73■□□□□ 0.43
HOXB3-211ENST00000490677 RPL37AP61513 92 aaKnown RBP17.73■□□□□ 0.43
HOXB3-211ENST00000490677 TSKUQ8WUA8 353 aa17.73■□□□□ 0.43
HOXB3-211ENST00000490677 RNF185Q96GF1 192 aa17.73■□□□□ 0.43
HOXB3-211ENST00000490677 FGF6P10767 208 aa17.72■□□□□ 0.43
HOXB3-211ENST00000490677 EIF5A2Q9GZV4 153 aaKnown RBP17.72■□□□□ 0.43
HOXB3-211ENST00000490677 IGKV3OR2-268A0A0C4DH90 116 aa17.71■□□□□ 0.43
HOXB3-211ENST00000490677 HIGD1CA8MV81 97 aa17.71■□□□□ 0.43
HOXB3-211ENST00000490677 ESDP10768 282 aa17.71■□□□□ 0.43
HOXB3-211ENST00000490677 TMEM191AQ9H0A3 160 aa17.71■□□□□ 0.43
HOXB3-211ENST00000490677 OSTCQ9NRP0 149 aa17.71■□□□□ 0.43
HOXB3-211ENST00000490677 HMCN2Q8NDA2 5059 aa17.7■□□□□ 0.42
HOXB3-211ENST00000490677 I3L3M4 83 aa17.7■□□□□ 0.42
HOXB3-211ENST00000490677 TSHBP01222 138 aa17.7■□□□□ 0.42
HOXB3-211ENST00000490677 RPS10P46783 165 aaKnown RBP17.7■□□□□ 0.42
HOXB3-211ENST00000490677 CHCHD10Q8WYQ3 142 aaPredicted RBP17.7■□□□□ 0.42
HOXB3-211ENST00000490677 IGHV3-64A0A075B6Q5 118 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 A0A1B0GUT8 65 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 A0A1B0GVG6 124 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 ZNF727A8MUV8 499 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 OXTP01178 125 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 CHTF8P0CG12 524 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 AMMECR1LQ6DCA0 310 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 AP5S1Q9NUS5 200 aa17.69■□□□□ 0.42
HOXB3-211ENST00000490677 POLR2KP53803 58 aaKnown RBP17.68■□□□□ 0.42
HOXB3-211ENST00000490677 RNASEKQ6P5S7 137 aaKnown RBP17.68■□□□□ 0.42
HOXB3-211ENST00000490677 V9GYV3 84 aa17.68■□□□□ 0.42
HOXB3-211ENST00000490677 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.67■□□□□ 0.42
HOXB3-211ENST00000490677 RAB4AP20338 218 aa17.67■□□□□ 0.42
HOXB3-211ENST00000490677 SPACA4Q8TDM5 124 aa17.67■□□□□ 0.42
HOXB3-211ENST00000490677 ZNF25P17030 456 aaPredicted RBP17.66■□□□□ 0.42
HOXB3-211ENST00000490677 PMCHP20382 165 aa17.66■□□□□ 0.42
HOXB3-211ENST00000490677 FOXI1Q12951 378 aa17.66■□□□□ 0.42
HOXB3-211ENST00000490677 AMN1Q8IY45 258 aa17.65■□□□□ 0.42
HOXB3-211ENST00000490677 OR5A1Q8NGJ0 315 aa17.65■□□□□ 0.42
HOXB3-211ENST00000490677 BORCS7Q96B45 105 aa17.65■□□□□ 0.42
HOXB3-211ENST00000490677 ST20Q9HBF5 79 aa17.65■□□□□ 0.42
HOXB3-211ENST00000490677 TMEM242Q9NWH2 141 aa17.65■□□□□ 0.42
HOXB3-211ENST00000490677 A0A087WYN8 130 aa17.64■□□□□ 0.41
HOXB3-211ENST00000490677 TRBV27A0A0K0K1C4 114 aa17.64■□□□□ 0.41
HOXB3-211ENST00000490677 HIGD2BQ4VC39 106 aa17.64■□□□□ 0.41
HOXB3-211ENST00000490677 GVQW2A0A096LPI5 108 aaPredicted RBP17.63■□□□□ 0.41
HOXB3-211ENST00000490677 C9JQL5 133 aa17.63■□□□□ 0.41
HOXB3-211ENST00000490677 CFAP161Q6P656 301 aa17.63■□□□□ 0.41
HOXB3-211ENST00000490677 NUP35Q8NFH5 326 aa17.63■□□□□ 0.41
HOXB3-211ENST00000490677 ISOC2Q96AB3 205 aa17.63■□□□□ 0.41
HOXB3-211ENST00000490677 MRAP2Q96G30 205 aa17.62■□□□□ 0.41
HOXB3-211ENST00000490677 MRPL52Q86TS9 123 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms