RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FAM74A7A6NL05 159 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 NDUFS6O75380 124 aaKnown RBP5.13□□□□□ -1.59
USP39-216ENST00000490193 LTAP01374 205 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 GAGE6Q13070 117 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 ZNF726P1Q15940 193 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 PET117Q6UWS5 81 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 C20orf203Q8NBC4 194 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 OR10AG1Q8NH19 301 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 S100ZQ8WXG8 99 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 DERL1Q9BUN8 251 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 IGLV10-54A0A075B6I4 117 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 CTXND1A0A1B0GTU2 59 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 SNAI2O43623 268 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 SSNA1O43805 119 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 UPK1BO75841 260 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 UBE2G2P60604 165 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 UBE2G1P62253 170 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 REG3GQ6UW15 175 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 SPINK6Q6UWN8 80 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 AQP10Q96PS8 301 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 TCEAL7Q9BRU2 100 aa5.12□□□□□ -1.59
USP39-216ENST00000490193 ZNF471Q9BX82 626 aaPredicted RBP5.12□□□□□ -1.59
USP39-216ENST00000490193 LPAP08519 4548 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 SCGB1D1O95968 90 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 OR5AL1P0C617 328 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 G0S2P27469 103 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 FHITP49789 147 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 IFITM3Q01628 133 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 COX6A2Q02221 97 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 C15orf56Q8N910 161 aa5.11□□□□□ -1.59
USP39-216ENST00000490193 IGLV4-60A0A075B6I1 120 aa5.1□□□□□ -1.59
USP39-216ENST00000490193 F5H697 171 aa5.1□□□□□ -1.59
USP39-216ENST00000490193 RAB4AP20338 218 aa5.1□□□□□ -1.59
USP39-216ENST00000490193 RPS10P46783 165 aaKnown RBP5.1□□□□□ -1.59
USP39-216ENST00000490193 SRSF9Q13242 221 aaKnown RBP eCLIP5.1□□□□□ -1.59
USP39-216ENST00000490193 GTSF1Q8WW33 167 aa5.1□□□□□ -1.59
USP39-216ENST00000490193 GFRA4Q9GZZ7 299 aa5.1□□□□□ -1.59
USP39-216ENST00000490193 MUC21A0A0G2JKD1 596 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 H0Y8G0 127 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 M0QY20 66 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 SPANXN1Q5VSR9 72 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 STPG4Q8N801 248 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 PRSS3P2Q8NHM4 247 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 PGLYRP4Q96LB8 373 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 AP1S3Q96PC3 154 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 TMEM243Q9BU79 118 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
USP39-216ENST00000490193 IGKV2-24A0A0C4DH68 120 aa5.08□□□□□ -1.6
USP39-216ENST00000490193 H7C1H1 209 aa5.08□□□□□ -1.6
USP39-216ENST00000490193 SMIM17P0DL12 118 aa5.08□□□□□ -1.6
USP39-216ENST00000490193 MED28Q9H204 178 aa5.08□□□□□ -1.6
USP39-216ENST00000490193 A0A096LNI7 61 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 GVQW2A0A096LPI5 108 aaPredicted RBP5.07□□□□□ -1.6
USP39-216ENST00000490193 H3BS24 57 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 TNFRSF6BO95407 300 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 AKR1C3P42330 323 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 RAB5CP51148 216 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 NKX2-5P52952 324 aaPredicted RBP5.07□□□□□ -1.6
USP39-216ENST00000490193 RPL7L1Q6DKI1 246 aaKnown RBP5.07□□□□□ -1.6
USP39-216ENST00000490193 Q6ZRP5 223 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 INO80EQ8NBZ0 244 aaPredicted RBP5.07□□□□□ -1.6
USP39-216ENST00000490193 LINC00474Q9P2X8 69 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 PKIGQ9Y2B9 76 aa5.07□□□□□ -1.6
USP39-216ENST00000490193 BORCS7-ASMTA0A0B4J1R7 106 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 MUC21A0A140T8X8 626 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 MAP1LC3B2A6NCE7 125 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 GAGE12HA6NDE8 117 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 SULT1A2P50226 295 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 HIGD2BQ4VC39 106 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 AKR1C8PQ5T2L2 129 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 SUMO4Q6EEV6 95 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 LYPD6BQ8NI32 183 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 STOML3Q8TAV4 291 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 MAP1LC3BQ9GZQ8 125 aa5.06□□□□□ -1.6
USP39-216ENST00000490193 IGLC6P0CF74 106 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 DEFA1P59665 94 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 DEFA3P59666 94 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 CST9LP1Q5W188 147 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 RASL11AQ6T310 242 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 BAGE2Q86Y30 109 aa5.05□□□□□ -1.6
USP39-216ENST00000490193 LINC00587B1AMM8 73 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 UBE2L6O14933 153 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 PAGE4O60829 102 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 MGPP08493 103 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 AMTP48728 403 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 Q5BKY6 102 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 CHCHD10Q8WYQ3 142 aaPredicted RBP5.04□□□□□ -1.6
USP39-216ENST00000490193 NIT2Q9NQR4 276 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 ALG5Q9Y673 324 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 MUC2Q02817 5179 aa5.04□□□□□ -1.6
USP39-216ENST00000490193 FAM231BA6NCW3 169 aa5.03□□□□□ -1.6
USP39-216ENST00000490193 CACNG7P62955 275 aa5.03□□□□□ -1.6
USP39-216ENST00000490193 FOXI1Q12951 378 aa5.03□□□□□ -1.6
USP39-216ENST00000490193 TPPP3Q9BW30 176 aa5.03□□□□□ -1.6
USP39-216ENST00000490193 VCX2Q9H322 139 aa5.03□□□□□ -1.6
USP39-216ENST00000490193 H7C423 109 aa5.02□□□□□ -1.61
USP39-216ENST00000490193 GIPP09681 153 aaPredicted RBP5.02□□□□□ -1.61
USP39-216ENST00000490193 TRGC1P0CF51 173 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms