RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
TM9SF3-206ENST00000490192 MRPS10P82664 201 aaKnown RBP2.32□□□□□ -2.04
TM9SF3-206ENST00000490192 C9orf116Q5BN46 136 aaPredicted RBP2.32□□□□□ -2.04
TM9SF3-206ENST00000490192 NDUFA11Q86Y39 141 aa2.32□□□□□ -2.04
TM9SF3-206ENST00000490192 MARF1Q9Y4F3 1742 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 AKAP12Q02952 1782 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 NBDYA0A0U1RRE5 68 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 A6NIN4 97 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 EFNA4P52798 201 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 FXYD3Q14802 87 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 Q56UQ5 140 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 Q6AWC8 147 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 XAF1Q6GPH4 301 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 DEFB132Q7Z7B7 95 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 SPAG17Q6Q759 2223 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 ASCC3Q8N3C0 2202 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 FLG2Q5D862 2391 aaPredicted RBP2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 PXDNQ92626 1479 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 RIMS1Q86UR5 1692 aaKnown RBP2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 FMN2Q9NZ56 1722 aa2.31□□□□□ -2.04
TM9SF3-206ENST00000490192 ANGP03950 147 aaKnown RBP2.3□□□□□ -2.04
TM9SF3-206ENST00000490192 Q6ZQY7 126 aa2.3□□□□□ -2.04
TM9SF3-206ENST00000490192 ZNF142P52746 1687 aaPredicted RBP2.3□□□□□ -2.04
TM9SF3-206ENST00000490192 LMO7Q8WWI1 1683 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 C1orf167Q5SNV9 1468 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 TRAV12-3A0A0B4J271 114 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 TCRBV3S1A0A5B6 114 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 GNG4P50150 75 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 Q6ZS92 163 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 Q86TA4 180 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 RPRMQ9NS64 109 aa2.29□□□□□ -2.04
TM9SF3-206ENST00000490192 ITSN1Q15811 1721 aa2.28□□□□□ -2.04
TM9SF3-206ENST00000490192 CBLN1P23435 193 aa2.28□□□□□ -2.04
TM9SF3-206ENST00000490192 NPC2P61916 151 aa2.28□□□□□ -2.04
TM9SF3-206ENST00000490192 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
TM9SF3-206ENST00000490192 CCL19Q99731 98 aa2.28□□□□□ -2.04
TM9SF3-206ENST00000490192 FAM208AQ9UK61 1670 aaKnown RBP2.28□□□□□ -2.05
TM9SF3-206ENST00000490192 ABCC6O95255 1503 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 SPTBP11277 2137 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 MRC1P22897 1456 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 DLG5Q8TDM6 1919 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 APOC4-APOC2K7ER74 178 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 APOC2P02655 101 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 TPPP2P59282 170 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 KRTAP21-3Q3LHN1 58 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 C5orf56Q8N8D9 126 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 C10orf82Q8WW14 230 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 C12orf57Q99622 126 aa2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 MUC22E2RYF6 1773 aaPredicted RBP2.27□□□□□ -2.05
TM9SF3-206ENST00000490192 DLEC1Q9Y238 1755 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 TEX49A0A1B0GTD5 131 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 ATP6V1G2-DDX39BF2Z307 99 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 CATR1Q13166 79 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 CYP2G1PQ6ZSU1 146 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 SPTSSBQ8NFR3 76 aa2.26□□□□□ -2.05
TM9SF3-206ENST00000490192 CRYBG1Q9Y4K1 1723 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 KIF1AQ12756 1690 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 ALS2Q96Q42 1657 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 TNFP01375 233 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 PPP3R1P63098 170 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 C12orf73Q69YU5 71 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 MRPL54Q6P161 138 aaKnown RBP2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 LINC00575Q6W349 94 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 KDM3BQ7LBC6 1761 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 CITO14578 2027 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 RREB1Q92766 1687 aa2.25□□□□□ -2.05
TM9SF3-206ENST00000490192 ABCA4P78363 2273 aa2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 KCPQ6ZWJ8 1503 aa2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 KIAA0100Q14667 2235 aaKnown RBP2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 CAV3P56539 151 aa2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 Q8N8P6 123 aa2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 TCEAL7Q9BRU2 100 aa2.24□□□□□ -2.05
TM9SF3-206ENST00000490192 LAMB1P07942 1786 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 MED12Q93074 2177 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 TRBV30A0A0K0K1B3 111 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 C20orf202A1L168 122 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 FXYD1O00168 92 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 IFNA17P01571 189 aa2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 RBM3P98179 157 aaKnown RBP2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 MAP2P11137 1827 aaKnown RBP2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 RGPD8O14715 1765 aaPredicted RBP2.23□□□□□ -2.05
TM9SF3-206ENST00000490192 PARP4Q9UKK3 1724 aaKnown RBP2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 PAPPAQ13219 1627 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 A0A0D9SFI3 127 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 INSL4Q14641 139 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 IER3IP1Q9Y5U9 82 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 SIPA1L3O60292 1781 aaPredicted RBP2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 ZNF609O15014 1411 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 PKD1L3Q7Z443 1732 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 C5P01031 1676 aa2.22□□□□□ -2.05
TM9SF3-206ENST00000490192 COL6A6A6NMZ7 2263 aa2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 LTN1O94822 1766 aa2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 ZNF56Q15929 161 aa2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 C9orf153Q5TBE3 101 aa2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 C14orf144Q96I85 54 aa2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 AFDNP55196 1824 aaKnown RBP2.21□□□□□ -2.06
TM9SF3-206ENST00000490192 TJP1Q07157 1748 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 PIGBOS1A0A0B4J2F0 54 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 TRBV10-3A0A0K0K1G6 114 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 OOSP1A8MZH6 123 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms