RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 LINC01556Q5JQF7 62 aa11.35□□□□□ -0.59
SFXN5-220ENST00000490056 DNAH6Q9C0G6 4158 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 VCYO14598 125 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 TSHBP01222 138 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 AMTP48728 403 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 GAGE6Q13070 117 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 TTC32Q5I0X7 151 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
SFXN5-220ENST00000490056 MRPL18Q9H0U6 180 aaKnown RBP11.34□□□□□ -0.59
SFXN5-220ENST00000490056 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
SFXN5-220ENST00000490056 PHOX2AO14813 284 aa11.33□□□□□ -0.6
SFXN5-220ENST00000490056 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
SFXN5-220ENST00000490056 SCO1O75880 301 aa11.32□□□□□ -0.6
SFXN5-220ENST00000490056 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
SFXN5-220ENST00000490056 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
SFXN5-220ENST00000490056 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 A0A087WX48 190 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 MT-ND6P03923 174 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
SFXN5-220ENST00000490056 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 CHCHD7Q9BUK0 85 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 TRAPPC1Q9Y5R8 145 aa11.31□□□□□ -0.6
SFXN5-220ENST00000490056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-220ENST00000490056 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-220ENST00000490056 FCER1GP30273 86 aa11.3□□□□□ -0.6
SFXN5-220ENST00000490056 Q8N976 141 aa11.3□□□□□ -0.6
SFXN5-220ENST00000490056 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
SFXN5-220ENST00000490056 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
SFXN5-220ENST00000490056 RBX1P62877 108 aa11.29□□□□□ -0.6
SFXN5-220ENST00000490056 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
SFXN5-220ENST00000490056 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
SFXN5-220ENST00000490056 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
SFXN5-220ENST00000490056 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 K7EP13 123 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 UBE2L6O14933 153 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 TCAPO15273 167 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 ESDP10768 282 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 KLK12Q9UKR0 248 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 RYR3Q15413 4870 aa11.28□□□□□ -0.6
SFXN5-220ENST00000490056 PKIAP61925 76 aa11.27□□□□□ -0.61
SFXN5-220ENST00000490056 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
SFXN5-220ENST00000490056 RTL8CO15255 209 aa11.26□□□□□ -0.61
SFXN5-220ENST00000490056 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
SFXN5-220ENST00000490056 Q9HAA7 133 aa11.26□□□□□ -0.61
SFXN5-220ENST00000490056 COLCA2A8K830 154 aa11.25□□□□□ -0.61
SFXN5-220ENST00000490056 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
SFXN5-220ENST00000490056 Q8N8P6 123 aa11.25□□□□□ -0.61
SFXN5-220ENST00000490056 FGF6P10767 208 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 RAB5AP20339 215 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 S100A1P23297 94 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
SFXN5-220ENST00000490056 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 UBE2WQ96B02 151 aa11.24□□□□□ -0.61
SFXN5-220ENST00000490056 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
SFXN5-220ENST00000490056 H7C423 109 aa11.23□□□□□ -0.61
SFXN5-220ENST00000490056 CLPSL2Q6UWE3 100 aa11.23□□□□□ -0.61
SFXN5-220ENST00000490056 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
SFXN5-220ENST00000490056 LAGE3Q14657 143 aa11.22□□□□□ -0.61
SFXN5-220ENST00000490056 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
SFXN5-220ENST00000490056 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
SFXN5-220ENST00000490056 LINC00269Q8N2A0 174 aa11.22□□□□□ -0.61
SFXN5-220ENST00000490056 NXT2Q9NPJ8 142 aaKnown RBP11.22□□□□□ -0.61
SFXN5-220ENST00000490056 BTF3P20290 206 aaKnown RBP11.21□□□□□ -0.61
SFXN5-220ENST00000490056 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.61
SFXN5-220ENST00000490056 TRAV8-3A0A0A6YYJ7 113 aa11.2□□□□□ -0.62
SFXN5-220ENST00000490056 TRGC2P03986 189 aa11.2□□□□□ -0.62
SFXN5-220ENST00000490056 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
SFXN5-220ENST00000490056 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
SFXN5-220ENST00000490056 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
SFXN5-220ENST00000490056 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
SFXN5-220ENST00000490056 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
SFXN5-220ENST00000490056 CRPP02741 224 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SFXN5-220ENST00000490056 TNP2Q05952 138 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 REG3AQ06141 175 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
SFXN5-220ENST00000490056 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
SFXN5-220ENST00000490056 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
SFXN5-220ENST00000490056 Q0VG73 95 aa11.17□□□□□ -0.62
SFXN5-220ENST00000490056 ORMDL2Q53FV1 153 aa11.17□□□□□ -0.62
SFXN5-220ENST00000490056 DGAT2L7PQ6IED9 249 aa11.17□□□□□ -0.62
SFXN5-220ENST00000490056 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 RNASE13Q5GAN3 156 aaKnown RBP11.16□□□□□ -0.62
SFXN5-220ENST00000490056 LINC00336Q6ZUF6 198 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 FA2HQ7L5A8 372 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 URB1-AS1Q96HZ7 61 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
SFXN5-220ENST00000490056 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
SFXN5-220ENST00000490056 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
SFXN5-220ENST00000490056 LINC01546A6NGU7 62 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms