RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 DAZ4Q86SG3 579 aaKnown RBP14.63□□□□□ -0.07
SND1-214ENST00000489417 VSIG2Q96IQ7 327 aa14.63□□□□□ -0.07
SND1-214ENST00000489417 DAZ3Q9NR90 486 aaKnown RBP14.63□□□□□ -0.07
SND1-214ENST00000489417 TRAV26-1A0A087WT03 109 aa14.62□□□□□ -0.07
SND1-214ENST00000489417 BTF3P20290 206 aaKnown RBP14.62□□□□□ -0.07
SND1-214ENST00000489417 COTL1Q14019 142 aa14.62□□□□□ -0.07
SND1-214ENST00000489417 OR10D4PQ8NGN7 298 aa14.62□□□□□ -0.07
SND1-214ENST00000489417 HUWE1Q7Z6Z7 4374 aaKnown RBP14.61□□□□□ -0.07
SND1-214ENST00000489417 LEPROTL1O95214 131 aa14.6□□□□□ -0.07
SND1-214ENST00000489417 AKR1D1P51857 326 aa14.6□□□□□ -0.07
SND1-214ENST00000489417 G0S2P27469 103 aa14.59□□□□□ -0.07
SND1-214ENST00000489417 HSPB8Q9UJY1 196 aa14.59□□□□□ -0.07
SND1-214ENST00000489417 DNAH9Q9NYC9 4486 aa14.58□□□□□ -0.07
SND1-214ENST00000489417 LINC00173Q6ZV60 143 aa14.58□□□□□ -0.07
SND1-214ENST00000489417 DEFB131BA0A096LNP1 70 aa14.58□□□□□ -0.08
SND1-214ENST00000489417 C2orf66Q6UXQ4 117 aa14.58□□□□□ -0.08
SND1-214ENST00000489417 TOMM6Q96B49 74 aa14.58□□□□□ -0.08
SND1-214ENST00000489417 ATP6V0E2Q8NHE4 81 aa14.57□□□□□ -0.08
SND1-214ENST00000489417 CYSLTR1Q9Y271 337 aa14.57□□□□□ -0.08
SND1-214ENST00000489417 MEGF8Q7Z7M0 2845 aa14.57□□□□□ -0.08
SND1-214ENST00000489417 TRAV10A0A0B4J240 114 aa14.56□□□□□ -0.08
SND1-214ENST00000489417 C20orf203Q8NBC4 194 aa14.56□□□□□ -0.08
SND1-214ENST00000489417 CHCHD7Q9BUK0 85 aa14.56□□□□□ -0.08
SND1-214ENST00000489417 GTSF1LQ9H1H1 148 aa14.56□□□□□ -0.08
SND1-214ENST00000489417 ICOSQ9Y6W8 199 aa14.56□□□□□ -0.08
SND1-214ENST00000489417 LINC01549A6NIU2 74 aa14.55□□□□□ -0.08
SND1-214ENST00000489417 H3BNG1 76 aa14.55□□□□□ -0.08
SND1-214ENST00000489417 MRPL23Q16540 153 aaKnown RBP14.55□□□□□ -0.08
SND1-214ENST00000489417 NTM-AS1Q6ZSK4 140 aa14.55□□□□□ -0.08
SND1-214ENST00000489417 KRTDAPP60985 99 aa14.54□□□□□ -0.08
SND1-214ENST00000489417 TMEM97Q5BJF2 176 aa14.54□□□□□ -0.08
SND1-214ENST00000489417 C3orf79P0CE67 100 aa14.53□□□□□ -0.08
SND1-214ENST00000489417 RPL39P62891 51 aaKnown RBP14.53□□□□□ -0.08
SND1-214ENST00000489417 SCGB3A1Q96QR1 104 aa14.53□□□□□ -0.08
SND1-214ENST00000489417 A0A096LPF7 62 aa14.52□□□□□ -0.08
SND1-214ENST00000489417 ATP5LO75964 103 aa14.52□□□□□ -0.08
SND1-214ENST00000489417 SH2D6Q7Z4S9 175 aa14.52□□□□□ -0.08
SND1-214ENST00000489417 IFI27L1Q96BM0 104 aa14.52□□□□□ -0.08
SND1-214ENST00000489417 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
SND1-214ENST00000489417 TRBV25-1A0A075B6N4 114 aa14.49□□□□□ -0.09
SND1-214ENST00000489417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.49□□□□□ -0.09
SND1-214ENST00000489417 TRBV6-8A0A0A6YYG3 113 aa14.49□□□□□ -0.09
SND1-214ENST00000489417 IGKV2-29A2NJV5 120 aaPredicted RBP14.49□□□□□ -0.09
SND1-214ENST00000489417 ERASQ7Z444 233 aa14.49□□□□□ -0.09
SND1-214ENST00000489417 TMEM243Q9BU79 118 aa14.49□□□□□ -0.09
SND1-214ENST00000489417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.49□□□□□ -0.09
SND1-214ENST00000489417 IGIPA6NJ69 53 aa14.48□□□□□ -0.09
SND1-214ENST00000489417 SYS1-DBNDD2H3BUS1 97 aa14.48□□□□□ -0.09
SND1-214ENST00000489417 TMEM141Q96I45 108 aa14.48□□□□□ -0.09
SND1-214ENST00000489417 TIMM17AQ99595 171 aa14.48□□□□□ -0.09
SND1-214ENST00000489417 JOSD1Q15040 202 aaPredicted RBP14.47□□□□□ -0.09
SND1-214ENST00000489417 H0Y8G0 127 aa14.46□□□□□ -0.09
SND1-214ENST00000489417 PET117Q6UWS5 81 aa14.46□□□□□ -0.09
SND1-214ENST00000489417 Q6ZN92 141 aa14.46□□□□□ -0.09
SND1-214ENST00000489417 SPANXA1Q9NS26 97 aa14.46□□□□□ -0.09
SND1-214ENST00000489417 COL7A1Q02388 2944 aa14.45□□□□□ -0.1
SND1-214ENST00000489417 UBE2L6O14933 153 aa14.45□□□□□ -0.1
SND1-214ENST00000489417 PYY3Q5JQD4 70 aa14.45□□□□□ -0.1
SND1-214ENST00000489417 UBE2D4Q9Y2X8 147 aa14.45□□□□□ -0.1
SND1-214ENST00000489417 PYGO1Q9Y3Y4 419 aa14.45□□□□□ -0.1
SND1-214ENST00000489417 H7C423 109 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 SCGB1D1O95968 90 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 PRSS1P07477 247 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 SPATA12Q7Z6I5 190 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 Q8N976 141 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 TIMM21Q9BVV7 248 aa14.44□□□□□ -0.1
SND1-214ENST00000489417 SMAGPQ0VAQ4 97 aa14.43□□□□□ -0.1
SND1-214ENST00000489417 BAALCQ8WXS3 180 aa14.43□□□□□ -0.1
SND1-214ENST00000489417 CHCHD5Q9BSY4 110 aa14.43□□□□□ -0.1
SND1-214ENST00000489417 SMIM6P0DI80 62 aa14.42□□□□□ -0.1
SND1-214ENST00000489417 FGF6P10767 208 aa14.42□□□□□ -0.1
SND1-214ENST00000489417 TIRAPP58753 221 aa14.42□□□□□ -0.1
SND1-214ENST00000489417 CEMP1Q6PRD7 247 aaPredicted RBP14.42□□□□□ -0.1
SND1-214ENST00000489417 MRPL52Q86TS9 123 aaKnown RBP14.42□□□□□ -0.1
SND1-214ENST00000489417 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
SND1-214ENST00000489417 IGLV4-3A0A075B6K6 122 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 C20orf202A1L168 122 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 NPSP0C0P6 89 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 GAGE6Q13070 117 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 LELP1Q5T871 98 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 LYPD5Q6UWN5 251 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 PRKDCP78527 4128 aaKnown RBP14.41□□□□□ -0.1
SND1-214ENST00000489417 LINC01545Q5VT33 79 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 AMMECR1LQ6DCA0 310 aa14.41□□□□□ -0.1
SND1-214ENST00000489417 OPRPNQ99935 248 aaPredicted RBP14.41□□□□□ -0.1
SND1-214ENST00000489417 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
SND1-214ENST00000489417 LGALS9CQ6DKI2 356 aa14.4□□□□□ -0.1
SND1-214ENST00000489417 DGAT2L7PQ6IED9 249 aa14.4□□□□□ -0.1
SND1-214ENST00000489417 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
SND1-214ENST00000489417 IGLL5B9A064 214 aa14.39□□□□□ -0.11
SND1-214ENST00000489417 FAM104AQ969W3 186 aa14.39□□□□□ -0.11
SND1-214ENST00000489417 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
SND1-214ENST00000489417 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
SND1-214ENST00000489417 ODF1Q14990 250 aa14.38□□□□□ -0.11
SND1-214ENST00000489417 PMVKQ15126 192 aa14.38□□□□□ -0.11
SND1-214ENST00000489417 Q6ZUT4 128 aa14.38□□□□□ -0.11
SND1-214ENST00000489417 OR5A1Q8NGJ0 315 aa14.38□□□□□ -0.11
SND1-214ENST00000489417 TMEM101Q96IK0 257 aa14.38□□□□□ -0.11
SND1-214ENST00000489417 A0A087WX48 190 aa14.37□□□□□ -0.11
SND1-214ENST00000489417 PRSS29PA6NIE9 313 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms