RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 RAX2Q96IS3 184 aa6.67□□□□□ -1.34
EXOSC1-211ENST00000489158 VCX2Q9H322 139 aa6.67□□□□□ -1.34
EXOSC1-211ENST00000489158 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
EXOSC1-211ENST00000489158 SETD2Q9BYW2 2564 aaPredicted RBP6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 CCL24O00175 119 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 PPP1R17O96001 155 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 RPL39P62891 51 aaKnown RBP6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 PMVKQ15126 192 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 TMEM170BQ5T4T1 132 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
EXOSC1-211ENST00000489158 WNK1Q9H4A3 2382 aa6.65□□□□□ -1.34
EXOSC1-211ENST00000489158 OVOL1O14753 267 aa6.65□□□□□ -1.34
EXOSC1-211ENST00000489158 RNASE3P12724 160 aaKnown RBP6.65□□□□□ -1.34
EXOSC1-211ENST00000489158 C10orf126Q8N4M7 172 aa6.65□□□□□ -1.34
EXOSC1-211ENST00000489158 PRO1854Q9UHT4 67 aa6.65□□□□□ -1.34
EXOSC1-211ENST00000489158 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.35
EXOSC1-211ENST00000489158 F6UB75 175 aa6.65□□□□□ -1.35
EXOSC1-211ENST00000489158 ZNRF2Q8NHG8 242 aa6.65□□□□□ -1.35
EXOSC1-211ENST00000489158 TRAV2A0A0B4J234 112 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 LINC00315P59091 139 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 ZFAND6Q6FIF0 208 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 TRPT1Q86TN4 253 aaKnown RBP6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 POM121L12Q8N7R1 296 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 DYNLRB2Q8TF09 96 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 JPT2Q9H910 190 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 KIF25-AS1Q9Y6Z4 181 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 MUC4Q99102 2169 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 SOCS3O14543 225 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 ID1P41134 155 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 POLR2KP53803 58 aaKnown RBP6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 TMEM141Q96I45 108 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 AMELXQ99217 191 aa6.64□□□□□ -1.35
EXOSC1-211ENST00000489158 A4D1N5 150 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 C9JAW5 83 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 TMEM262E9PQX1 116 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 H7C2G1 150 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 J3QQQ9 107 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 VCYO14598 125 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 SLC25A20O43772 301 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 FAM19A4Q96LR4 140 aa6.63□□□□□ -1.35
EXOSC1-211ENST00000489158 A0A087WWL8 130 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 TRAV25A0A0B4J276 109 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 F5H697 171 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 PF4P02776 101 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 RPL32P62910 135 aaKnown RBP6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 ZNF876PQ49A33 203 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 CITED1Q99966 193 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 NXPH4O95158 308 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 IGHV3-33P01772 117 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 DCANP1Q8TF63 244 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 TMEM263Q8WUH6 116 aaKnown RBP6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 JMJD1CQ15652 2540 aa6.62□□□□□ -1.35
EXOSC1-211ENST00000489158 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 K7EQG2 157 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 IGHV3-64A0A075B6Q5 118 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 LEPROTO15243 131 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 APRG1Q8IVJ8 170 aa6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 ZNF256Q9Y2P7 627 aaPredicted RBP6.61□□□□□ -1.35
EXOSC1-211ENST00000489158 M0QXV9 152 aa6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 GAGE5Q13069 117 aa6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 GAGE6Q13070 117 aa6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 DEFB114Q30KQ6 69 aa6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 TMEM61Q8N0U2 210 aa6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 NTN5Q8WTR8 489 aaPredicted RBP6.6□□□□□ -1.35
EXOSC1-211ENST00000489158 TMEM223A0PJW6 202 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 NHLRC4P0CG21 123 aaPredicted RBP6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 Q1RN00 199 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 KRTAP24-1Q3LI83 254 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 FAM159AQ6UWV7 190 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 TRBV7-9A0A0J9YWB2 115 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 TRBV27A0A0K0K1C4 114 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 B5MCH6 92 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 P0DMU3 169 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 FAM231AP0DMU4 169 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 FAM231CP0DMU5 169 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 GAGE2EQ4V326 116 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 FAM74A4Q5TZK3 123 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 Q8N1Y9 231 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 LINC00482Q8N8I6 264 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 GAGE2DQ9UEU5 116 aa6.59□□□□□ -1.35
EXOSC1-211ENST00000489158 TRAV4A0A0B4J268 109 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 RHODO00212 210 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 SNCGO76070 127 aa6.58□□□□□ -1.36
EXOSC1-211ENST00000489158 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms