RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 SMIM6P0DI80 62 aa8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 DAD1P61803 113 aa8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 PMCHL1Q16048 86 aa8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
HLA-DOB-209ENST00000488325 I3L3M4 83 aa8.52□□□□□ -1.05
HLA-DOB-209ENST00000488325 NUDT3O95989 172 aa8.52□□□□□ -1.05
HLA-DOB-209ENST00000488325 RHOHQ15669 191 aa8.52□□□□□ -1.05
HLA-DOB-209ENST00000488325 Q6ZSN1 163 aa8.52□□□□□ -1.05
HLA-DOB-209ENST00000488325 PRADC1Q9BSG0 188 aa8.52□□□□□ -1.05
HLA-DOB-209ENST00000488325 NACAE9PAV3 2078 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 DEFB4AO15263 64 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 P0DMU3 169 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 KRTDAPP60985 99 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 RETNQ9HD89 108 aa8.51□□□□□ -1.05
HLA-DOB-209ENST00000488325 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 A0A096LNJ9 63 aa8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 FHL2Q14192 279 aa8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 MAP1LC3CQ9BXW4 147 aa8.5□□□□□ -1.05
HLA-DOB-209ENST00000488325 ATP5LO75964 103 aa8.49□□□□□ -1.05
HLA-DOB-209ENST00000488325 ATP5G1P05496 136 aa8.49□□□□□ -1.05
HLA-DOB-209ENST00000488325 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
HLA-DOB-209ENST00000488325 SLC25A29Q8N8R3 303 aa8.49□□□□□ -1.05
HLA-DOB-209ENST00000488325 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
HLA-DOB-209ENST00000488325 C20orf202A1L168 122 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 SCGB1D1O95968 90 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 COTL1Q14019 142 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 ZNRF2Q8NHG8 242 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 CELA1Q9UNI1 258 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 HHLA3Q9XRX5 114 aa8.48□□□□□ -1.05
HLA-DOB-209ENST00000488325 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 GAGE12JA6NER3 117 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 TSHBP01222 138 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 UBE2D3P61077 147 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 UBE2D2P62837 147 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 GAGE1Q13065 139 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 GAGE4Q13068 117 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 GAGE5Q13069 117 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 PET117Q6UWS5 81 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
HLA-DOB-209ENST00000488325 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
HLA-DOB-209ENST00000488325 CRYBA4P53673 196 aa8.46□□□□□ -1.06
HLA-DOB-209ENST00000488325 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
HLA-DOB-209ENST00000488325 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
HLA-DOB-209ENST00000488325 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.06
HLA-DOB-209ENST00000488325 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
HLA-DOB-209ENST00000488325 PAX4O43316 350 aa8.45□□□□□ -1.06
HLA-DOB-209ENST00000488325 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
HLA-DOB-209ENST00000488325 SCGB3A1Q96QR1 104 aa8.45□□□□□ -1.06
HLA-DOB-209ENST00000488325 C12orf57Q99622 126 aa8.45□□□□□ -1.06
HLA-DOB-209ENST00000488325 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 F5H768 121 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 GYPEP15421 78 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 C12orf74Q32Q52 190 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 Q6ZN92 141 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 TMEM141Q96I45 108 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 Q9UF83 564 aa8.44□□□□□ -1.06
HLA-DOB-209ENST00000488325 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 NUPR2A6NF83 97 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 S100A12P80511 92 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 ERASQ7Z444 233 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 TIMM17AQ99595 171 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 GTSF1LQ9H1H1 148 aa8.43□□□□□ -1.06
HLA-DOB-209ENST00000488325 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 H0Y8G0 127 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 PRSS1P07477 247 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 HTN3P15516 51 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 C11orf45Q8TAV5 145 aa8.42□□□□□ -1.06
HLA-DOB-209ENST00000488325 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 NPSP0C0P6 89 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 PAPPA-AS1Q5QFB9 102 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 Q8N976 141 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 DEFB104AQ8WTQ1 72 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms