RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CYSLTR1Q9Y271 337 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 NDUFA4O00483 81 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 CREBL2O60519 120 aaPredicted RBP2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 FAM107AO95990 144 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 NAPSAO96009 420 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 DHFRP00374 187 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 PRM2P04554 102 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 SPART-AS1P0CW21 52 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 DEFA4P12838 97 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 HIST1H1BP16401 226 aaKnown RBP2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 S100A7P31151 101 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 FXYD7P58549 80 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 HSPE1P61604 102 aaKnown RBP2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 SNRPGP62308 76 aaKnown RBP2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 PPP3R1P63098 170 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 GLIPR1L1Q6UWM5 242 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 C6orf201Q7Z4U5 140 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 DHFR2Q86XF0 187 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 STX12Q86Y82 276 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 MCFD2Q8NI22 146 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 BTF3L4Q96K17 158 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 Q9BRP9 147 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 RHPN1-AS1Q9BWJ2 59 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 IL36BQ9NZH7 164 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 SMPXQ9UHP9 88 aa2.04□□□□□ -2.08
PRPF38A-203ENST00000487160 CD2P06729 351 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 PRB4P10163 310 aaPredicted RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 G6PCP35575 357 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 CSN1S1P47710 185 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 ZNF80P51504 273 aaPredicted RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 GTF2A1P52655 376 aaPredicted RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 CRYBA4P53673 196 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 CCL18P55774 89 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 RPL19P84098 196 aaKnown RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 KLK9Q2XQG4 91 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 XAF1Q6GPH4 301 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 Q6ZRN7 208 aaPredicted RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 DEFB107AQ8IZN7 70 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 RNASE11Q8TAA1 199 aaKnown RBP2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 DEFB104AQ8WTQ1 72 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 DNAJC9Q8WXX5 260 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 DERL1Q9BUN8 251 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 KLK9Q9UKQ9 250 aa2.03□□□□□ -2.08
PRPF38A-203ENST00000487160 LRP2P98164 4655 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV14DV4A0A0A6YYC5 116 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 IGLC7A0M8Q6 106 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 TMEM189A5PLL7 270 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 ZNF705FA8MVS1 300 aaPredicted RBP2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 ZNF705BP0CI00 300 aaPredicted RBP2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 ASIPP42127 132 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 HINT1P49773 126 aaPredicted RBP2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 DEFA3P59666 94 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 Q56UQ5 140 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 ZNF705AQ6ZN79 300 aaPredicted RBP2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 TMED4Q7Z7H5 227 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 ACBD7Q8N6N7 88 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 VSTM2AQ8TAG5 236 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 TMEM167AQ8TBQ9 72 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 CANT1Q8WVQ1 401 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 IMMP2LQ96T52 175 aa2.02□□□□□ -2.09
PRPF38A-203ENST00000487160 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV2A0A0B4J234 112 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 A0A0G2JQZ4 141 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 H3BRN7 92 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 IBA57Q5T440 356 aaKnown RBP2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 GOLT1AQ6ZVE7 132 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 LHFPL1Q86WI0 220 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 OR10J5Q8NHC4 309 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 TMEM70Q9BUB7 260 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 COMMD5Q9GZQ3 224 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 VCX3BQ9H321 246 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 NDUFB11Q9NX14 153 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 CKLFQ9UBR5 152 aa2.01□□□□□ -2.09
PRPF38A-203ENST00000487160 A0A087WTM6 91 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 TRBV6-7A0A0A0MS04 114 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 TRAV3A0A0B4J244 114 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 G3V2T6 193 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 H3BT86 120 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 J3QRK9 145 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 K7EIM0 57 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 CYB5BO43169 146 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 SULT1A3P0DMM9 295 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 SULT1A4P0DMN0 295 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 DEFB130BP0DP73 79 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 DEFB130AP0DP74 79 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BOP23527 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BBP33778 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 RPL28P46779 137 aaKnown RBP2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BDP58876 126 aa2□□□□□ -2.09
PRPF38A-203ENST00000487160 KRTAP10-4P60372 401 aaPredicted RBP2□□□□□ -2.09
PRPF38A-203ENST00000487160 HIST1H2BCP62807 126 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms