RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 RBMY1EA6NEQ0 496 aaKnown RBP5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 KNCNA6PVL3 124 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 RBMY1DP0C7P1 496 aaKnown RBP5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 CMC4P56277 68 aaPredicted RBP5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 NFE4Q86UQ8 179 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 C20orf203Q8NBC4 194 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 CST9LQ9H4G1 147 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 TRBV7-3A0A075B6L6 115 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 A0A1B0GWB2 263 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 A0A1W2PPM0 123 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 K7EP34 96 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 GCSHP23434 173 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 FXYD2P54710 66 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 TCTAP57738 103 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 BEAN1Q3B7T3 259 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 CD300EQ496F6 205 aaPredicted RBP5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 AMMECR1LQ6DCA0 310 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 NEGR1Q7Z3B1 354 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 MAPKAPK5-AS1Q8N8E1 139 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 C11orf72Q8NBR9 251 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 OR5A1Q8NGJ0 315 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 DNAJC30Q96LL9 226 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 DUX3Q96PT4 197 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 FAM110AQ9BQ89 295 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 PRADC1Q9BSG0 188 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 TTTY13Q9BZ97 58 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 TSSC4Q9Y5U2 329 aaPredicted RBP5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 ABCA12Q86UK0 2595 aa5.13□□□□□ -1.59
SMARCAL1-212ENST00000486983 GAGE10A6NGK3 116 aa5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 RPL39P62891 51 aaKnown RBP5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 ODF3L2Q3SX64 289 aa5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 PHLDA1Q8WV24 401 aaPredicted RBP5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 ESM1Q9NQ30 184 aa5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 ITPR3Q14573 2671 aa5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 OTOGQ6ZRI0 2925 aa5.12□□□□□ -1.59
SMARCAL1-212ENST00000486983 MUC4Q99102 2169 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 ZNF815PA8K554 130 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 H3BUT2 72 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 CCL24O00175 119 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 RS1O15537 224 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 NDUFA7O95182 113 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 IGHV3-53P01767 116 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 P0DMU3 169 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 FAM231AP0DMU4 169 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 FAM231CP0DMU5 169 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 FABP2P12104 132 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 GAGE13Q4V321 117 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 HIST1H4GQ99525 98 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 SMR3AQ99954 134 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 SPANXB1Q9NS25 103 aaPredicted RBP5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 AKAP9Q99996 3911 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 CSPG4Q6UVK1 2322 aa5.11□□□□□ -1.59
SMARCAL1-212ENST00000486983 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 CD28P10747 220 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 HILS1P60008 231 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 STHQ8IWL8 128 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 ZNRF2Q8NHG8 242 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 LINC01006Q8NI28 216 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 AMELXQ99217 191 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 LINC01587Q99440 93 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 SPANXA1Q9NS26 97 aa5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 NHP2Q9NX24 153 aaKnown RBP5.1□□□□□ -1.59
SMARCAL1-212ENST00000486983 TMEM223A0PJW6 202 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 LEPROTO15243 131 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 CIDEAO60543 219 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 C12orf74Q32Q52 190 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 SCGB1D4Q6XE38 83 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 ZNF418Q8TF45 676 aaPredicted RBP5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 VCX2Q9H322 139 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 SPCS1Q9Y6A9 102 aa5.09□□□□□ -1.59
SMARCAL1-212ENST00000486983 F8P00451 2351 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 HIVEP1P15822 2718 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 A0A0J9YY99 117 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 TRBV10-1A0A0K0K1A3 114 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGLL5B9A064 214 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 J3QQQ9 107 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 ZNF22P17026 224 aaPredicted RBP5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 UBE2D1P51668 147 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 MRPS36P82909 103 aaKnown RBP5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 TMEM170BQ5T4T1 132 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 C1orf158Q8N1D5 194 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 SLC25A29Q8N8R3 303 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 RNASE8Q8TDE3 154 aaKnown RBP5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 TMEM263Q8WUH6 116 aaKnown RBP5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 RAB37Q96AX2 223 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 PLEKHB2Q96CS7 222 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 CITED2Q99967 270 aaPredicted RBP5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 CHCHD7Q9BUK0 85 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 TIMM21Q9BVV7 248 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 YAE1D1Q9NRH1 226 aa5.08□□□□□ -1.6
SMARCAL1-212ENST00000486983 K7ERJ3 54 aa5.07□□□□□ -1.6
SMARCAL1-212ENST00000486983 K7ERU9 68 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms