RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 UBE2D2P62837 147 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 FHL2Q14192 279 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 MAJINQ3KP22 176 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
PRKCB-207ENST00000486868 NOTCH3Q9UM47 2321 aa8.27□□□□□ -1.09
PRKCB-207ENST00000486868 COX8AP10176 69 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 TMEM97Q5BJF2 176 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 SLC25A34Q6PIV7 304 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 OR11H2Q8NH07 326 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 ZNRF2Q8NHG8 242 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 CHCHD7Q9BUK0 85 aa8.26□□□□□ -1.09
PRKCB-207ENST00000486868 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
PRKCB-207ENST00000486868 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
PRKCB-207ENST00000486868 H7C423 109 aa8.25□□□□□ -1.09
PRKCB-207ENST00000486868 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
PRKCB-207ENST00000486868 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
PRKCB-207ENST00000486868 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
PRKCB-207ENST00000486868 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
PRKCB-207ENST00000486868 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
PRKCB-207ENST00000486868 SIVA1O15304 175 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 HNRNPA3P51991 378 aaKnown RBP8.24□□□□□ -1.09
PRKCB-207ENST00000486868 MRPS36P82909 103 aaKnown RBP8.24□□□□□ -1.09
PRKCB-207ENST00000486868 DEFB135Q30KP9 77 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 ANKRD39Q53RE8 183 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 Q8NAQ8 132 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 AMELXQ99217 191 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 Q9UF83 564 aa8.24□□□□□ -1.09
PRKCB-207ENST00000486868 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 IGLV4-3A0A075B6K6 122 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 IGHV4-28A0A0C4DH34 117 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 M0R143 59 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 NFE4Q86UQ8 179 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
PRKCB-207ENST00000486868 NIPBLQ6KC79 2804 aaeCLIP8.23□□□□□ -1.09
PRKCB-207ENST00000486868 ZC2HC1BQ5TFG8 222 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 FAM222AQ5U5X8 452 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 STPG4Q8N801 248 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 VCX2Q9H322 139 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 PRO0255Q9UI72 69 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
PRKCB-207ENST00000486868 MAST4O15021 2626 aa8.21□□□□□ -1.09
PRKCB-207ENST00000486868 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 GAGE12JA6NER3 117 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 FGF6P10767 208 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 EMP1P54849 157 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 GAGE1Q13065 139 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 GAGE4Q13068 117 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 GAGE5Q13069 117 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
PRKCB-207ENST00000486868 PHLDA1Q8WV24 401 aaPredicted RBP8.21□□□□□ -1.1
PRKCB-207ENST00000486868 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
PRKCB-207ENST00000486868 DEFB130BP0DP73 79 aa8.2□□□□□ -1.1
PRKCB-207ENST00000486868 DEFB130AP0DP74 79 aa8.2□□□□□ -1.1
PRKCB-207ENST00000486868 FAM104AQ969W3 186 aa8.2□□□□□ -1.1
PRKCB-207ENST00000486868 C2orf88Q9BSF0 95 aa8.2□□□□□ -1.1
PRKCB-207ENST00000486868 E9PLD3 99 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 HERVK_113P61574 105 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 DAD1P61803 113 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 CTAG1AP78358 180 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
PRKCB-207ENST00000486868 HIGD1BQ9P298 99 aa8.19□□□□□ -1.1
PRKCB-207ENST00000486868 TRBV25-1A0A075B6N4 114 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 IGHV3-38A0A0C4DH36 116 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 ATP5G1P05496 136 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 ZNF25P17030 456 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-207ENST00000486868 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
PRKCB-207ENST00000486868 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 SNHG12Q9BXW3 62 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 VWFP04275 2813 aa8.18□□□□□ -1.1
PRKCB-207ENST00000486868 TRBV6-8A0A0A6YYG3 113 aa8.17□□□□□ -1.1
PRKCB-207ENST00000486868 G3V4G9 280 aa8.17□□□□□ -1.1
PRKCB-207ENST00000486868 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
PRKCB-207ENST00000486868 FBN1P35555 2871 aaKnown RBP8.16□□□□□ -1.1
PRKCB-207ENST00000486868 TRRAPQ9Y4A5 3859 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-207ENST00000486868 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 IGKV2-29A2NJV5 120 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-207ENST00000486868 PAX4O43316 350 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 NMUP48645 174 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 TIRAPP58753 221 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 SEC11AP67812 179 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 DGAT2L7PQ6IED9 249 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 ATP6V0E2Q8NHE4 81 aa8.16□□□□□ -1.1
PRKCB-207ENST00000486868 IGKV2D-26A0A0A0MRZ7 120 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms