RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SMR3AQ99954 134 aa9.88□□□□□ -0.83
HMGN1-216ENST00000486741 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 H3BMM0 161 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 CEND1Q8N111 149 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 DCANP1Q8TF63 244 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 LINC00158P58513 81 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 IGSF10Q6WRI0 2623 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 DEFB4AO15263 64 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 C3orf56Q8N813 242 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
HMGN1-216ENST00000486741 DEFB114Q30KQ6 69 aa9.86□□□□□ -0.83
HMGN1-216ENST00000486741 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
HMGN1-216ENST00000486741 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
HMGN1-216ENST00000486741 U3KQK5 164 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 A0A0J9YY99 117 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 USP24Q9UPU5 2620 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 LRRC75A-AS1Q8N1F1 130 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 NRACQ8N912 160 aa9.85□□□□□ -0.83
HMGN1-216ENST00000486741 F5H768 121 aa9.84□□□□□ -0.83
HMGN1-216ENST00000486741 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
HMGN1-216ENST00000486741 PSMG3-AS1Q96PY0 264 aa9.84□□□□□ -0.83
HMGN1-216ENST00000486741 TRBV7-9A0A0J9YWB2 115 aa9.84□□□□□ -0.83
HMGN1-216ENST00000486741 MALP21145 153 aa9.84□□□□□ -0.83
HMGN1-216ENST00000486741 HERV-K104P63124 156 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 HELZ2Q9BYK8 2649 aaKnown RBP9.83□□□□□ -0.84
HMGN1-216ENST00000486741 MED14OSP0DP75 135 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 RHOHQ15669 191 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 EDA2RQ9HAV5 297 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 LGALS9O00182 355 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
HMGN1-216ENST00000486741 SIVA1O15304 175 aa9.82□□□□□ -0.84
HMGN1-216ENST00000486741 C9orf153Q5TBE3 101 aa9.82□□□□□ -0.84
HMGN1-216ENST00000486741 Q6ZTI0 123 aa9.82□□□□□ -0.84
HMGN1-216ENST00000486741 C6orf226Q5I0X4 101 aa9.82□□□□□ -0.84
HMGN1-216ENST00000486741 PFN2P35080 140 aa9.82□□□□□ -0.84
HMGN1-216ENST00000486741 KLLNB2CW77 178 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 TRAV8-3A0A0A6YYJ7 113 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 INAFM1C9JVW0 142 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 MORN3Q6PF18 240 aaPredicted RBP9.81□□□□□ -0.84
HMGN1-216ENST00000486741 MAPKAPK5-AS1Q8N8E1 139 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 FGF6P10767 208 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 IFITM1P13164 125 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
HMGN1-216ENST00000486741 DAD1P61803 113 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 DAND5Q8N907 189 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 F8P00451 2351 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 A0A096LNJ9 63 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 PAX4O43316 350 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 DNAL4O96015 105 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
HMGN1-216ENST00000486741 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
HMGN1-216ENST00000486741 RNF183Q96D59 192 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 ZFHX4Q86UP3 3567 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
HMGN1-216ENST00000486741 COPS9Q8WXC6 57 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 M0QY20 66 aa9.79□□□□□ -0.84
HMGN1-216ENST00000486741 CRLF1O75462 422 aa9.78□□□□□ -0.84
HMGN1-216ENST00000486741 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
HMGN1-216ENST00000486741 RELNP78509 3460 aa9.78□□□□□ -0.84
HMGN1-216ENST00000486741 C5orf38Q86SI9 138 aa9.78□□□□□ -0.84
HMGN1-216ENST00000486741 TMEM86BQ8N661 226 aa9.77□□□□□ -0.84
HMGN1-216ENST00000486741 E9PLD3 99 aa9.77□□□□□ -0.85
HMGN1-216ENST00000486741 SOCS3O14543 225 aa9.77□□□□□ -0.85
HMGN1-216ENST00000486741 TRBV7-3A0A075B6L6 115 aa9.77□□□□□ -0.85
HMGN1-216ENST00000486741 TIMM17AQ99595 171 aa9.77□□□□□ -0.85
HMGN1-216ENST00000486741 NEXN-AS1Q8NBZ9 246 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 Q9H8V8 135 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 PRO1854Q9UHT4 67 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 IGLL5B9A064 214 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 NXPH4O95158 308 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 CRYGDP07320 174 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 PTH2Q96A98 100 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 K7EQD1 137 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 XCL1P47992 114 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 Q6ZUT4 128 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 C2orf91Q6ZV80 131 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 ATRQ13535 2644 aa9.76□□□□□ -0.85
HMGN1-216ENST00000486741 A4D1N5 150 aa9.75□□□□□ -0.85
HMGN1-216ENST00000486741 GYPEP15421 78 aa9.75□□□□□ -0.85
HMGN1-216ENST00000486741 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
HMGN1-216ENST00000486741 TRAV25A0A0B4J276 109 aa9.75□□□□□ -0.85
HMGN1-216ENST00000486741 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
HMGN1-216ENST00000486741 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
HMGN1-216ENST00000486741 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 TAL2Q16559 108 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 MUSTN1Q8IVN3 82 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 CRPP02741 224 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 RNF152Q8N8N0 203 aa9.74□□□□□ -0.85
HMGN1-216ENST00000486741 ANGP03950 147 aaKnown RBP9.74□□□□□ -0.85
HMGN1-216ENST00000486741 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
HMGN1-216ENST00000486741 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms