RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 K7EQD1 137 aa10.38□□□□□ -0.75
POLR2J3-204ENST00000486319 TRAV12-1A0A0B4J245 112 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 LINC00587B1AMM8 73 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 EMP1P54849 157 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 ODF1Q14990 250 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 MAJINQ3KP22 176 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 TMEM141Q96I45 108 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
POLR2J3-204ENST00000486319 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 RPL36ALQ969Q0 106 aaKnown RBP10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 RETNQ9HD89 108 aa10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
POLR2J3-204ENST00000486319 A0A087WX48 190 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 MIFP14174 115 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 C20orf203Q8NBC4 194 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 RNF183Q96D59 192 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 MIEN1Q9BRT3 115 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
POLR2J3-204ENST00000486319 TRGV4A0A0C4DH28 118 aa10.34□□□□□ -0.75
POLR2J3-204ENST00000486319 IGIPA6NJ69 53 aa10.34□□□□□ -0.75
POLR2J3-204ENST00000486319 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
POLR2J3-204ENST00000486319 Q9UF83 564 aa10.34□□□□□ -0.75
POLR2J3-204ENST00000486319 DPM2O94777 84 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 IGKCP01834 107 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 COTL1Q14019 142 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 BAALCQ8WXS3 180 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 TENM3Q9P273 2699 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 F8VRH5 84 aa10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 DAZ4Q86SG3 579 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 DAZ3Q9NR90 486 aaKnown RBP10.33□□□□□ -0.76
POLR2J3-204ENST00000486319 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 DEFB130BP0DP73 79 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 DEFB130AP0DP74 79 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 PLNP26678 52 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 FHL2Q14192 279 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 FAM222AQ5U5X8 452 aa10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-204ENST00000486319 UBE2D3P61077 147 aa10.31□□□□□ -0.76
POLR2J3-204ENST00000486319 UBE2D2P62837 147 aa10.31□□□□□ -0.76
POLR2J3-204ENST00000486319 MUC7Q8TAX7 377 aa10.31□□□□□ -0.76
POLR2J3-204ENST00000486319 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
POLR2J3-204ENST00000486319 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
POLR2J3-204ENST00000486319 IGHV3-38A0A0C4DH36 116 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 NPSP0C0P6 89 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 PMVKQ15126 192 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 Q8NAQ8 132 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 C14orf144Q96I85 54 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
POLR2J3-204ENST00000486319 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 GAGE1Q13065 139 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 GAGE4Q13068 117 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 GAGE5Q13069 117 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 HHLA3Q9XRX5 114 aa10.29□□□□□ -0.76
POLR2J3-204ENST00000486319 STPG4Q8N801 248 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 CRYBA4P53673 196 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 ANKRD39Q53RE8 183 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 CST9LQ9H4G1 147 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 SPANXA1Q9NS26 97 aa10.28□□□□□ -0.76
POLR2J3-204ENST00000486319 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
POLR2J3-204ENST00000486319 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
POLR2J3-204ENST00000486319 SLC25A34Q6PIV7 304 aa10.27□□□□□ -0.77
POLR2J3-204ENST00000486319 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 DEFB4AO15263 64 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 COX8AP10176 69 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 HNRNPA3P51991 378 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 DAD1P61803 113 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 VCX2Q9H322 139 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
POLR2J3-204ENST00000486319 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
POLR2J3-204ENST00000486319 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
POLR2J3-204ENST00000486319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-204ENST00000486319 LOC100131303A0A0U1RQF7 123 aa10.24□□□□□ -0.77
POLR2J3-204ENST00000486319 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
POLR2J3-204ENST00000486319 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
POLR2J3-204ENST00000486319 MRPL52Q86TS9 123 aaKnown RBP10.24□□□□□ -0.77
POLR2J3-204ENST00000486319 ATP5G1P05496 136 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms