RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DNAH8Q96JB1 4490 aa11.6□□□□□ -0.55
COL6A1-204ENST00000486023 MIAQ16674 131 aa11.59□□□□□ -0.55
COL6A1-204ENST00000486023 HIGD1CA8MV81 97 aa11.57□□□□□ -0.56
COL6A1-204ENST00000486023 REG3AQ06141 175 aa11.57□□□□□ -0.56
COL6A1-204ENST00000486023 TMEM241Q24JQ0 296 aa11.57□□□□□ -0.56
COL6A1-204ENST00000486023 IGLV4-60A0A075B6I1 120 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 IGKV3OR2-268A0A0C4DH90 116 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 FAM229AH3BQW9 127 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 CT83Q5H943 113 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 C20orf203Q8NBC4 194 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 OSTCQ9NRP0 149 aa11.56□□□□□ -0.56
COL6A1-204ENST00000486023 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 C9JQL5 133 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
COL6A1-204ENST00000486023 ADIRFQ15847 76 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 C14orf177Q52M58 125 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 PRR34Q9NV39 138 aa11.55□□□□□ -0.56
COL6A1-204ENST00000486023 PMCHP20382 165 aa11.54□□□□□ -0.56
COL6A1-204ENST00000486023 PEA15Q15121 130 aa11.54□□□□□ -0.56
COL6A1-204ENST00000486023 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
COL6A1-204ENST00000486023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-204ENST00000486023 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
COL6A1-204ENST00000486023 SDHAF1A6NFY7 115 aa11.53□□□□□ -0.56
COL6A1-204ENST00000486023 NDUFS6O75380 124 aaKnown RBP11.53□□□□□ -0.56
COL6A1-204ENST00000486023 GAS8-AS1O95177 125 aa11.53□□□□□ -0.56
COL6A1-204ENST00000486023 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
COL6A1-204ENST00000486023 AMMECR1LQ6DCA0 310 aa11.53□□□□□ -0.56
COL6A1-204ENST00000486023 A0A1B0GUV1 79 aa11.52□□□□□ -0.57
COL6A1-204ENST00000486023 APCSP02743 223 aa11.52□□□□□ -0.57
COL6A1-204ENST00000486023 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
COL6A1-204ENST00000486023 RNASEKQ6P5S7 137 aaKnown RBP11.52□□□□□ -0.57
COL6A1-204ENST00000486023 ISOC2Q96AB3 205 aa11.52□□□□□ -0.57
COL6A1-204ENST00000486023 V9GYV3 84 aa11.52□□□□□ -0.57
COL6A1-204ENST00000486023 PRSS1P07477 247 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 RIGQ13278 110 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 NAT8Q9UHE5 227 aa11.51□□□□□ -0.57
COL6A1-204ENST00000486023 I3L3M4 83 aa11.5□□□□□ -0.57
COL6A1-204ENST00000486023 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
COL6A1-204ENST00000486023 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
COL6A1-204ENST00000486023 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 RAB4AP20338 218 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
COL6A1-204ENST00000486023 NCR2O95944 276 aa11.48□□□□□ -0.57
COL6A1-204ENST00000486023 SCXQ7RTU7 201 aa11.48□□□□□ -0.57
COL6A1-204ENST00000486023 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
COL6A1-204ENST00000486023 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
COL6A1-204ENST00000486023 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
COL6A1-204ENST00000486023 FGF6P10767 208 aa11.47□□□□□ -0.57
COL6A1-204ENST00000486023 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
COL6A1-204ENST00000486023 CAMPP49913 170 aa11.47□□□□□ -0.57
COL6A1-204ENST00000486023 Q6ZSA8 131 aa11.47□□□□□ -0.57
COL6A1-204ENST00000486023 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
COL6A1-204ENST00000486023 LINC00528Q8N1L1 170 aa11.46□□□□□ -0.57
COL6A1-204ENST00000486023 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
COL6A1-204ENST00000486023 TSHBP01222 138 aa11.44□□□□□ -0.58
COL6A1-204ENST00000486023 DGAT2L7PQ6IED9 249 aa11.44□□□□□ -0.58
COL6A1-204ENST00000486023 CLRN3Q8NCR9 226 aa11.44□□□□□ -0.58
COL6A1-204ENST00000486023 CIRBP-AS1Q8TBR5 109 aa11.44□□□□□ -0.58
COL6A1-204ENST00000486023 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
COL6A1-204ENST00000486023 AP5S1Q9NUS5 200 aa11.43□□□□□ -0.58
COL6A1-204ENST00000486023 SMIM27A0A1W2PRY6 76 aa11.42□□□□□ -0.58
COL6A1-204ENST00000486023 H7C423 109 aa11.42□□□□□ -0.58
COL6A1-204ENST00000486023 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
COL6A1-204ENST00000486023 FCER1GP30273 86 aa11.42□□□□□ -0.58
COL6A1-204ENST00000486023 MRPL51Q4U2R6 128 aaKnown RBP11.42□□□□□ -0.58
COL6A1-204ENST00000486023 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
COL6A1-204ENST00000486023 CHCHD10Q8WYQ3 142 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-204ENST00000486023 VCYO14598 125 aa11.41□□□□□ -0.58
COL6A1-204ENST00000486023 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
COL6A1-204ENST00000486023 RAB14P61106 215 aa11.41□□□□□ -0.58
COL6A1-204ENST00000486023 C9orf163Q8N9P6 203 aa11.41□□□□□ -0.58
COL6A1-204ENST00000486023 OR5A1Q8NGJ0 315 aa11.41□□□□□ -0.58
COL6A1-204ENST00000486023 DPH3Q96FX2 82 aa11.41□□□□□ -0.58
COL6A1-204ENST00000486023 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.58
COL6A1-204ENST00000486023 FAM104BQ5XKR9 115 aa11.4□□□□□ -0.58
COL6A1-204ENST00000486023 ESDP10768 282 aa11.39□□□□□ -0.59
COL6A1-204ENST00000486023 CKS2P33552 79 aa11.39□□□□□ -0.59
COL6A1-204ENST00000486023 XCL1P47992 114 aa11.39□□□□□ -0.59
COL6A1-204ENST00000486023 TRBV27A0A0K0K1C4 114 aa11.38□□□□□ -0.59
COL6A1-204ENST00000486023 C7orf77A4D0Y5 90 aa11.38□□□□□ -0.59
COL6A1-204ENST00000486023 PPP1R17O96001 155 aa11.38□□□□□ -0.59
COL6A1-204ENST00000486023 ZNF25P17030 456 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-204ENST00000486023 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
COL6A1-204ENST00000486023 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
COL6A1-204ENST00000486023 NRACQ8N912 160 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms