RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 MED9Q9NWA0 146 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 IGLV4-60A0A075B6I1 120 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 NUDT11Q96G61 164 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 RNF185Q96GF1 192 aa7.34□□□□□ -1.23
SCFD1-206ENST00000484733 BCL2P10415 239 aa7.33□□□□□ -1.24
SCFD1-206ENST00000484733 GFRA4Q9GZZ7 299 aa7.33□□□□□ -1.24
SCFD1-206ENST00000484733 IGLV10-54A0A075B6I4 117 aa7.33□□□□□ -1.24
SCFD1-206ENST00000484733 PANO1I0J062 215 aa7.33□□□□□ -1.24
SCFD1-206ENST00000484733 COTL1Q14019 142 aa7.33□□□□□ -1.24
SCFD1-206ENST00000484733 AP5S1Q9NUS5 200 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-206ENST00000484733 hDV102S1A0JD36 115 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 UBE2L6O14933 153 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 AMTP48728 403 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
SCFD1-206ENST00000484733 SLC51BQ86UW2 128 aa7.32□□□□□ -1.24
SCFD1-206ENST00000484733 NCR2O95944 276 aa7.31□□□□□ -1.24
SCFD1-206ENST00000484733 SLPIP03973 132 aa7.31□□□□□ -1.24
SCFD1-206ENST00000484733 TCTE3Q8IZS6 198 aa7.31□□□□□ -1.24
SCFD1-206ENST00000484733 RPP21Q9H633 154 aaKnown RBP7.31□□□□□ -1.24
SCFD1-206ENST00000484733 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 Q6ZRU5 148 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 H7C423 109 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 TWIST1Q15672 202 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 HMCN2Q8NDA2 5059 aa7.3□□□□□ -1.24
SCFD1-206ENST00000484733 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
SCFD1-206ENST00000484733 K7EN84 100 aa7.29□□□□□ -1.24
SCFD1-206ENST00000484733 SPACA4Q8TDM5 124 aa7.29□□□□□ -1.24
SCFD1-206ENST00000484733 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
SCFD1-206ENST00000484733 TEX261Q6UWH6 196 aa7.28□□□□□ -1.24
SCFD1-206ENST00000484733 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
SCFD1-206ENST00000484733 PLAC8Q9NZF1 115 aa7.28□□□□□ -1.24
SCFD1-206ENST00000484733 RNASE7Q9H1E1 156 aaKnown RBP7.28□□□□□ -1.24
SCFD1-206ENST00000484733 A0A087WYN8 130 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 FAM231DQ6ZW35 169 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 SMIM15Q7Z3B0 74 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 GTSF1Q8WW33 167 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 FAM210AQ96ND0 272 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 Q6ZNX1 250 aa7.27□□□□□ -1.25
SCFD1-206ENST00000484733 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 TMEM250H0YL14 139 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 RPS10P46783 165 aaKnown RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 FOXA3P55318 350 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 GATCO43716 136 aaKnown RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 APCSP02743 223 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-206ENST00000484733 DPH3Q96FX2 82 aa7.26□□□□□ -1.25
SCFD1-206ENST00000484733 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-206ENST00000484733 A8MWL6 223 aa7.25□□□□□ -1.25
SCFD1-206ENST00000484733 NDUFS6O75380 124 aaKnown RBP7.25□□□□□ -1.25
SCFD1-206ENST00000484733 CHTF8P0CG12 524 aa7.25□□□□□ -1.25
SCFD1-206ENST00000484733 CT83Q5H943 113 aa7.25□□□□□ -1.25
SCFD1-206ENST00000484733 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 FGF6P10767 208 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 BLOC1S1P78537 153 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 OR5A1Q8NGJ0 315 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 LYPD6BQ8NI32 183 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-206ENST00000484733 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-206ENST00000484733 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 I3L3M4 83 aa7.24□□□□□ -1.25
SCFD1-206ENST00000484733 ESDP10768 282 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 FOXI1Q12951 378 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 RNASEKQ6P5S7 137 aaKnown RBP7.23□□□□□ -1.25
SCFD1-206ENST00000484733 C7orf33Q8WU49 177 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 IGKV3OR2-268A0A0C4DH90 116 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 PMCHP20382 165 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 COX6A2Q02221 97 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 PKIGQ9Y2B9 76 aa7.23□□□□□ -1.25
SCFD1-206ENST00000484733 PRSS3P2Q8NHM4 247 aa7.22□□□□□ -1.25
SCFD1-206ENST00000484733 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
SCFD1-206ENST00000484733 PHOX2AO14813 284 aa7.22□□□□□ -1.25
SCFD1-206ENST00000484733 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 TSHBP01222 138 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 MRPL52Q86TS9 123 aaKnown RBP7.21□□□□□ -1.26
SCFD1-206ENST00000484733 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 BTF3L4Q96K17 158 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 ST20Q9HBF5 79 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 IGHV1-58A0A0C4DH39 117 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
SCFD1-206ENST00000484733 MAJINQ3KP22 176 aa7.21□□□□□ -1.26
SCFD1-206ENST00000484733 TSKUQ8WUA8 353 aa7.2□□□□□ -1.26
SCFD1-206ENST00000484733 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
SCFD1-206ENST00000484733 A0A1B0GUT8 65 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 MRAP2Q96G30 205 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
SCFD1-206ENST00000484733 TRBV27A0A0K0K1C4 114 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms