RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 C4orf3Q8WVX3 66 aa14.38□□□□□ -0.11
LIMS2-215ENST00000484252 M0QXV9 152 aa14.38□□□□□ -0.11
LIMS2-215ENST00000484252 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
LIMS2-215ENST00000484252 DEFB136Q30KP8 78 aa14.38□□□□□ -0.11
LIMS2-215ENST00000484252 IGHV3-73A0A0B4J1V6 119 aa14.37□□□□□ -0.11
LIMS2-215ENST00000484252 C18orf65Q6ZTR6 163 aa14.37□□□□□ -0.11
LIMS2-215ENST00000484252 TMEM61Q8N0U2 210 aa14.37□□□□□ -0.11
LIMS2-215ENST00000484252 SPANXA1Q9NS26 97 aa14.37□□□□□ -0.11
LIMS2-215ENST00000484252 A0A0B4J2C4 111 aa14.36□□□□□ -0.11
LIMS2-215ENST00000484252 PROK1P58294 105 aa14.36□□□□□ -0.11
LIMS2-215ENST00000484252 SFTA2Q6UW10 78 aa14.36□□□□□ -0.11
LIMS2-215ENST00000484252 A4D1N5 150 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 RAX2Q96IS3 184 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 DNAJC30Q96LL9 226 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 SPXQ9BT56 116 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 TIMM21Q9BVV7 248 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 CSMD2Q7Z408 3487 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-215ENST00000484252 TCL1BO95988 128 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 DYNLRB2Q8TF09 96 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 FAM104AQ969W3 186 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 MAP6D1Q9H9H5 199 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 FBN2P35556 2912 aa14.35□□□□□ -0.11
LIMS2-215ENST00000484252 ANKRD17O75179 2603 aaKnown RBP14.34□□□□□ -0.11
LIMS2-215ENST00000484252 IGHV3-64A0A075B6Q5 118 aa14.34□□□□□ -0.11
LIMS2-215ENST00000484252 BBC3Q96PG8 261 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-215ENST00000484252 IGHV3-30-3P0DP02 117 aa14.34□□□□□ -0.11
LIMS2-215ENST00000484252 TMEM263Q8WUH6 116 aaKnown RBP14.34□□□□□ -0.11
LIMS2-215ENST00000484252 USP24Q9UPU5 2620 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 A0A0J9YXY3 114 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 SCGB1C2P0DMR2 95 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 MUSTN1Q8IVN3 82 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 LRRC75A-AS1Q8N1F1 130 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 DOPEY2Q9Y3R5 2298 aa14.33□□□□□ -0.12
LIMS2-215ENST00000484252 TINCRA0A1B0GVN0 87 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 INSP01308 110 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 C11orf72Q8NBR9 251 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 LINC01587Q99440 93 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 CITED1Q99966 193 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 CHCHD7Q9BUK0 85 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 IGHV1-58A0A0C4DH39 117 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 IGHV3-53P01767 116 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 IGHV3-33P01772 117 aa14.32□□□□□ -0.12
LIMS2-215ENST00000484252 DEFB114Q30KQ6 69 aa14.31□□□□□ -0.12
LIMS2-215ENST00000484252 DEFB113Q30KQ7 82 aa14.31□□□□□ -0.12
LIMS2-215ENST00000484252 Q6ZSN1 163 aa14.31□□□□□ -0.12
LIMS2-215ENST00000484252 UBE2D4Q9Y2X8 147 aa14.31□□□□□ -0.12
LIMS2-215ENST00000484252 SS18L2Q9UHA2 77 aa14.3□□□□□ -0.12
LIMS2-215ENST00000484252 USP9YO00507 2555 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-215ENST00000484252 RS1O15537 224 aa14.3□□□□□ -0.12
LIMS2-215ENST00000484252 ANKRD29Q8N6D5 301 aa14.3□□□□□ -0.12
LIMS2-215ENST00000484252 ZNF462Q96JM2 2506 aa14.29□□□□□ -0.12
LIMS2-215ENST00000484252 KHDC1LQ5JSQ8 128 aa14.29□□□□□ -0.12
LIMS2-215ENST00000484252 CEMP1Q6PRD7 247 aaPredicted RBP14.29□□□□□ -0.12
LIMS2-215ENST00000484252 ZFYVE26Q68DK2 2539 aa14.29□□□□□ -0.12
LIMS2-215ENST00000484252 PRM2P04554 102 aa14.29□□□□□ -0.12
LIMS2-215ENST00000484252 ZANQ9Y493 2812 aa14.28□□□□□ -0.12
LIMS2-215ENST00000484252 EIF4EBP3O60516 100 aaPredicted RBP14.28□□□□□ -0.12
LIMS2-215ENST00000484252 TMEM86BQ8N661 226 aa14.28□□□□□ -0.12
LIMS2-215ENST00000484252 CR1P17927 2039 aa14.28□□□□□ -0.12
LIMS2-215ENST00000484252 GAGE2BQ13066 116 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 GAGE2EQ4V326 116 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 VSIG2Q96IQ7 327 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 LITAFQ99732 161 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 SPANXDQ9BXN6 97 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 SPANXCQ9NY87 97 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 GAGE2DQ9UEU5 116 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 FAM208BQ5VWN6 2430 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 POLQO75417 2590 aa14.27□□□□□ -0.12
LIMS2-215ENST00000484252 UBR5O95071 2799 aaPredicted RBP14.27□□□□□ -0.13
LIMS2-215ENST00000484252 SNCGO76070 127 aa14.27□□□□□ -0.13
LIMS2-215ENST00000484252 ZNF843Q8N446 348 aa14.27□□□□□ -0.13
LIMS2-215ENST00000484252 TRAV25A0A0B4J276 109 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 KRTAP10-9P60411 292 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 Q6Q795 121 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 Q9UF83 564 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 NDUFA12Q9UI09 145 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 PRRC2AP48634 2157 aaKnown RBP14.26□□□□□ -0.13
LIMS2-215ENST00000484252 TRAV8-3A0A0A6YYJ7 113 aa14.26□□□□□ -0.13
LIMS2-215ENST00000484252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-215ENST00000484252 IGKV2-29A2NJV5 120 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-215ENST00000484252 B5MCH6 92 aa14.25□□□□□ -0.13
LIMS2-215ENST00000484252 CFAP161Q6P656 301 aa14.25□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE12JA6NER3 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 SLC25A20O43772 301 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE7O76087 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE12FP0CL80 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE12GP0CL81 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE12IP0CL82 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 NDUFV3P56181 108 aaKnown RBP14.24□□□□□ -0.13
LIMS2-215ENST00000484252 GAGE4Q13068 117 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 RNASE13Q5GAN3 156 aaKnown RBP14.24□□□□□ -0.13
LIMS2-215ENST00000484252 Q96MF0 132 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
LIMS2-215ENST00000484252 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
LIMS2-215ENST00000484252 ADARB2-AS1A8MUL3 147 aa14.22□□□□□ -0.13
LIMS2-215ENST00000484252 TIRAPP58753 221 aa14.22□□□□□ -0.13
LIMS2-215ENST00000484252 MIAQ16674 131 aa14.22□□□□□ -0.13
LIMS2-215ENST00000484252 Q1RN00 199 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms