RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 DYNC1H1Q14204 4646 aaKnown RBP10.62□□□□□ -0.71
UPF3A-208ENST00000484246 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
UPF3A-208ENST00000484246 F8W036 122 aa10.62□□□□□ -0.71
UPF3A-208ENST00000484246 PPP1R17O96001 155 aa10.62□□□□□ -0.71
UPF3A-208ENST00000484246 TM2D2Q9BX73 214 aa10.62□□□□□ -0.71
UPF3A-208ENST00000484246 A0A087WTM6 91 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 RPS10P46783 165 aaKnown RBP10.61□□□□□ -0.71
UPF3A-208ENST00000484246 C10orf91Q5T1B1 145 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 IMMP2LQ96T52 175 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 Q9HAA7 133 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
UPF3A-208ENST00000484246 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 AMTP48728 403 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 CAMPP49913 170 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
UPF3A-208ENST00000484246 RBX1P62877 108 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 Q0VG73 95 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
UPF3A-208ENST00000484246 MRPL54Q6P161 138 aaKnown RBP10.6□□□□□ -0.71
UPF3A-208ENST00000484246 NRACQ8N912 160 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 RMI2Q96E14 147 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 CTDSP1Q9GZU7 261 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
UPF3A-208ENST00000484246 CARHSP1Q9Y2V2 147 aaKnown RBP10.6□□□□□ -0.71
UPF3A-208ENST00000484246 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
UPF3A-208ENST00000484246 I3L3M4 83 aa10.59□□□□□ -0.71
UPF3A-208ENST00000484246 GAGE6Q13070 117 aa10.59□□□□□ -0.71
UPF3A-208ENST00000484246 KIAA1109Q2LD37 5005 aa10.58□□□□□ -0.72
UPF3A-208ENST00000484246 H7C423 109 aa10.58□□□□□ -0.72
UPF3A-208ENST00000484246 EREGO14944 169 aa10.58□□□□□ -0.72
UPF3A-208ENST00000484246 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
UPF3A-208ENST00000484246 Q8N976 141 aa10.58□□□□□ -0.72
UPF3A-208ENST00000484246 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 PSCAO43653 123 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 APCSP02743 223 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 PPBPP02775 128 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
UPF3A-208ENST00000484246 CDPF1Q6NVV7 123 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 SPATA12Q7Z6I5 190 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 BTF3L4Q96K17 158 aa10.57□□□□□ -0.72
UPF3A-208ENST00000484246 TRAV9-1A0A075B6T8 112 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 PHOX2AO14813 284 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 TSHBP01222 138 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 CRPP02741 224 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
UPF3A-208ENST00000484246 ESDP10768 282 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 KRTAP10-2P60368 255 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 MIAQ16674 131 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 C20orf203Q8NBC4 194 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 C20orf78Q9BR46 151 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
UPF3A-208ENST00000484246 VCYO14598 125 aa10.55□□□□□ -0.72
UPF3A-208ENST00000484246 UBE2L6O14933 153 aa10.55□□□□□ -0.72
UPF3A-208ENST00000484246 PMCHP20382 165 aa10.55□□□□□ -0.72
UPF3A-208ENST00000484246 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
UPF3A-208ENST00000484246 CKS2P33552 79 aa10.54□□□□□ -0.72
UPF3A-208ENST00000484246 RHEBQ15382 184 aa10.54□□□□□ -0.72
UPF3A-208ENST00000484246 IGLV4-60A0A075B6I1 120 aa10.53□□□□□ -0.72
UPF3A-208ENST00000484246 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
UPF3A-208ENST00000484246 ZNF25P17030 456 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-208ENST00000484246 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
UPF3A-208ENST00000484246 NTN5Q8WTR8 489 aaPredicted RBP10.53□□□□□ -0.72
UPF3A-208ENST00000484246 C1orf43Q9BWL3 253 aa10.53□□□□□ -0.72
UPF3A-208ENST00000484246 D6R8Y8 96 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 Q8N814 137 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
UPF3A-208ENST00000484246 LRP1BQ9NZR2 4599 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 C7orf77A4D0Y5 90 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 TCAPO15273 167 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 FGF6P10767 208 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 REG3AQ06141 175 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 MRPL52Q86TS9 123 aaKnown RBP10.51□□□□□ -0.73
UPF3A-208ENST00000484246 CLRN3Q8NCR9 226 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
UPF3A-208ENST00000484246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
UPF3A-208ENST00000484246 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
UPF3A-208ENST00000484246 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
UPF3A-208ENST00000484246 NPYP01303 97 aa10.5□□□□□ -0.73
UPF3A-208ENST00000484246 WFDC2Q14508 124 aa10.5□□□□□ -0.73
UPF3A-208ENST00000484246 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
UPF3A-208ENST00000484246 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
UPF3A-208ENST00000484246 PRSS47A8MTI9 375 aa10.48□□□□□ -0.73
UPF3A-208ENST00000484246 S100PP25815 95 aa10.48□□□□□ -0.73
UPF3A-208ENST00000484246 FCER1GP30273 86 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms