RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 COL7A1Q02388 2944 aa10.63□□□□□ -0.71
PHGDH-205ENST00000482968 CIDEAO60543 219 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
PHGDH-205ENST00000482968 BVES-AS1Q5T3Y7 98 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 LINC01545Q5VT33 79 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 U3KQK5 164 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 M0QY20 66 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 PPBPP02775 128 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 ATP5G1P05496 136 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 P0DMU3 169 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 FAM231AP0DMU4 169 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 FAM231CP0DMU5 169 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 HTN3P15516 51 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 RBX1P62877 108 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 ANKRD39Q53RE8 183 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
PHGDH-205ENST00000482968 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
PHGDH-205ENST00000482968 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
PHGDH-205ENST00000482968 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
PHGDH-205ENST00000482968 Q9UF83 564 aa10.61□□□□□ -0.71
PHGDH-205ENST00000482968 NPYP01303 97 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 COX8AP10176 69 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 Q6ZTC4 211 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 A6NDN8 102 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 F5H768 121 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 H7C1H1 209 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 K7ERU9 68 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 TNFRSF6BO95407 300 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 GTF2H5Q6ZYL4 71 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 NRACQ8N912 160 aa10.6□□□□□ -0.71
PHGDH-205ENST00000482968 TAX1BP3O14907 124 aa10.59□□□□□ -0.71
PHGDH-205ENST00000482968 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
PHGDH-205ENST00000482968 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
PHGDH-205ENST00000482968 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
PHGDH-205ENST00000482968 K7EQD1 137 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 SIVA1O15304 175 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 PPP1R17O96001 155 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 CRYBA4P53673 196 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
PHGDH-205ENST00000482968 A0A0J9YY99 117 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 CST9LQ9H4G1 147 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
PHGDH-205ENST00000482968 PAX4O43316 350 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 SUMO2P61956 95 aaKnown RBP10.55□□□□□ -0.72
PHGDH-205ENST00000482968 RHOHQ15669 191 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 VPS25Q9BRG1 176 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
PHGDH-205ENST00000482968 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 GAGE12JA6NER3 117 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 GAGE4Q13068 117 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 GAGE5Q13069 117 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 OCIAD2Q56VL3 154 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 H3BRM9 83 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 IFI27P40305 119 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-205ENST00000482968 RNF151Q2KHN1 245 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 DEFB104AQ8WTQ1 72 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 DNAJC30Q96LL9 226 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 C20orf78Q9BR46 151 aa10.54□□□□□ -0.72
PHGDH-205ENST00000482968 TRBV7-3A0A075B6L6 115 aa10.53□□□□□ -0.72
PHGDH-205ENST00000482968 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
PHGDH-205ENST00000482968 GAGE10A6NGK3 116 aa10.53□□□□□ -0.72
PHGDH-205ENST00000482968 GYPEP15421 78 aa10.53□□□□□ -0.72
PHGDH-205ENST00000482968 RPL36AP83881 106 aaKnown RBP10.53□□□□□ -0.72
PHGDH-205ENST00000482968 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
PHGDH-205ENST00000482968 RPL36ALQ969Q0 106 aaKnown RBP10.53□□□□□ -0.72
PHGDH-205ENST00000482968 H0Y8G0 127 aa10.52□□□□□ -0.72
PHGDH-205ENST00000482968 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.72
PHGDH-205ENST00000482968 HSD52Q0P140 79 aa10.52□□□□□ -0.72
PHGDH-205ENST00000482968 TRAV10A0A0B4J240 114 aa10.52□□□□□ -0.73
PHGDH-205ENST00000482968 HBDP02042 147 aa10.52□□□□□ -0.73
PHGDH-205ENST00000482968 Q6ZVH6 145 aa10.52□□□□□ -0.73
PHGDH-205ENST00000482968 PHLDA1Q8WV24 401 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-205ENST00000482968 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
PHGDH-205ENST00000482968 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
PHGDH-205ENST00000482968 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
PHGDH-205ENST00000482968 C9orf118A6NHY6 69 aa10.5□□□□□ -0.73
PHGDH-205ENST00000482968 VCYO14598 125 aa10.5□□□□□ -0.73
PHGDH-205ENST00000482968 Q8N8P6 123 aa10.5□□□□□ -0.73
PHGDH-205ENST00000482968 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
PHGDH-205ENST00000482968 STAB2Q8WWQ8 2551 aa10.5□□□□□ -0.73
PHGDH-205ENST00000482968 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
PHGDH-205ENST00000482968 A6NJY4 79 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms