RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 AKR1C3P42330 323 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 MED28Q9H204 178 aa9.03□□□□□ -0.96
HDAC6-224ENST00000481929 LOC107984640A0A0U1RRK4 108 aa9.02□□□□□ -0.97
HDAC6-224ENST00000481929 H0Y9J4 135 aa9.02□□□□□ -0.97
HDAC6-224ENST00000481929 SSNA1O43805 119 aa9.02□□□□□ -0.97
HDAC6-224ENST00000481929 ZNF726P1Q15940 193 aa9.02□□□□□ -0.97
HDAC6-224ENST00000481929 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 UBE2D1P51668 147 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 STOML3Q8TAV4 291 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
HDAC6-224ENST00000481929 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
HDAC6-224ENST00000481929 XCL1P47992 114 aa9□□□□□ -0.97
HDAC6-224ENST00000481929 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
HDAC6-224ENST00000481929 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
HDAC6-224ENST00000481929 NDUFA13Q9P0J0 144 aa9□□□□□ -0.97
HDAC6-224ENST00000481929 INMT-MINDY4F8WBC2 141 aa8.99□□□□□ -0.97
HDAC6-224ENST00000481929 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
HDAC6-224ENST00000481929 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
HDAC6-224ENST00000481929 ISOC2Q96AB3 205 aa8.99□□□□□ -0.97
HDAC6-224ENST00000481929 FGF6P10767 208 aa8.98□□□□□ -0.97
HDAC6-224ENST00000481929 FHITP49789 147 aa8.98□□□□□ -0.97
HDAC6-224ENST00000481929 EIF5AP63241 154 aaKnown RBP8.98□□□□□ -0.97
HDAC6-224ENST00000481929 CST9LP1Q5W188 147 aa8.98□□□□□ -0.97
HDAC6-224ENST00000481929 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
HDAC6-224ENST00000481929 CCL25O15444 150 aa8.97□□□□□ -0.97
HDAC6-224ENST00000481929 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
HDAC6-224ENST00000481929 BCL2P10415 239 aa8.97□□□□□ -0.97
HDAC6-224ENST00000481929 CAMPP49913 170 aa8.97□□□□□ -0.97
HDAC6-224ENST00000481929 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
HDAC6-224ENST00000481929 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-224ENST00000481929 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-224ENST00000481929 S100A9P06702 114 aaKnown RBP8.96□□□□□ -0.98
HDAC6-224ENST00000481929 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
HDAC6-224ENST00000481929 MLST8Q9BVC4 326 aa8.96□□□□□ -0.98
HDAC6-224ENST00000481929 MAP1LC3B2A6NCE7 125 aa8.95□□□□□ -0.98
HDAC6-224ENST00000481929 H7C423 109 aa8.95□□□□□ -0.98
HDAC6-224ENST00000481929 MAP1LC3BQ9GZQ8 125 aa8.95□□□□□ -0.98
HDAC6-224ENST00000481929 CRCT1Q9UGL9 99 aa8.95□□□□□ -0.98
HDAC6-224ENST00000481929 IGLV4-69A0A075B6H9 119 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 A0A087WZ39 114 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 APOMO95445 188 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 NTF3P20783 257 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 RPL18AQ02543 176 aaKnown RBP8.94□□□□□ -0.98
HDAC6-224ENST00000481929 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
HDAC6-224ENST00000481929 APCSP02743 223 aa8.93□□□□□ -0.98
HDAC6-224ENST00000481929 TRGC1P0CF51 173 aa8.93□□□□□ -0.98
HDAC6-224ENST00000481929 ZNF25P17030 456 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-224ENST00000481929 Q6ZNX1 250 aa8.93□□□□□ -0.98
HDAC6-224ENST00000481929 NUP35Q8NFH5 326 aa8.93□□□□□ -0.98
HDAC6-224ENST00000481929 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
HDAC6-224ENST00000481929 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-224ENST00000481929 TSPAN13O95857 204 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 NCR2O95944 276 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 IGLC6P0CF74 106 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 MEF2BQ02080 365 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-224ENST00000481929 RPL7L1Q6DKI1 246 aaKnown RBP8.92□□□□□ -0.98
HDAC6-224ENST00000481929 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 MARVELD1Q9BSK0 173 aa8.92□□□□□ -0.98
HDAC6-224ENST00000481929 BORCS7-ASMTA0A0B4J1R7 106 aa8.91□□□□□ -0.98
HDAC6-224ENST00000481929 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
HDAC6-224ENST00000481929 SS18Q15532 418 aa8.91□□□□□ -0.98
HDAC6-224ENST00000481929 LCE2DQ5TA82 110 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-224ENST00000481929 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
HDAC6-224ENST00000481929 PAGE4O60829 102 aa8.9□□□□□ -0.98
HDAC6-224ENST00000481929 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
HDAC6-224ENST00000481929 OR2D3Q8NGH3 330 aa8.9□□□□□ -0.98
HDAC6-224ENST00000481929 MALP21145 153 aa8.89□□□□□ -0.99
HDAC6-224ENST00000481929 EIF5AL1Q6IS14 154 aaKnown RBP8.89□□□□□ -0.99
HDAC6-224ENST00000481929 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
HDAC6-224ENST00000481929 CARHSP1Q9Y2V2 147 aaKnown RBP8.89□□□□□ -0.99
HDAC6-224ENST00000481929 F2Z2F3 143 aa8.88□□□□□ -0.99
HDAC6-224ENST00000481929 PFDN1O60925 122 aa8.88□□□□□ -0.99
HDAC6-224ENST00000481929 BCL2L11O43521 198 aa8.87□□□□□ -0.99
HDAC6-224ENST00000481929 UPK1BO75841 260 aa8.87□□□□□ -0.99
HDAC6-224ENST00000481929 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
HDAC6-224ENST00000481929 C2orf48Q96LS8 159 aa8.87□□□□□ -0.99
HDAC6-224ENST00000481929 COX7A2LO14548 114 aa8.86□□□□□ -0.99
HDAC6-224ENST00000481929 S100ZQ8WXG8 99 aa8.86□□□□□ -0.99
HDAC6-224ENST00000481929 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-224ENST00000481929 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
HDAC6-224ENST00000481929 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
HDAC6-224ENST00000481929 DEFA1P59665 94 aa8.85□□□□□ -0.99
HDAC6-224ENST00000481929 LYZL1Q6UWQ5 148 aa8.85□□□□□ -0.99
HDAC6-224ENST00000481929 TMUB2Q71RG4 321 aa8.85□□□□□ -0.99
HDAC6-224ENST00000481929 RPL39LQ96EH5 51 aaKnown RBP8.85□□□□□ -0.99
HDAC6-224ENST00000481929 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
HDAC6-224ENST00000481929 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
HDAC6-224ENST00000481929 SDHAF1A6NFY7 115 aa8.84□□□□□ -0.99
HDAC6-224ENST00000481929 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
HDAC6-224ENST00000481929 FAM19A5Q7Z5A7 132 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-224ENST00000481929 IFNA1P01562 189 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms