RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 C9orf163Q8N9P6 203 aa11.95□□□□□ -0.5
CLK1-211ENST00000481641 RPP21Q9H633 154 aaKnown RBP11.95□□□□□ -0.5
CLK1-211ENST00000481641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.95□□□□□ -0.5
CLK1-211ENST00000481641 FAT3Q8TDW7 4589 aa11.94□□□□□ -0.5
CLK1-211ENST00000481641 A0A1B0GUV1 79 aa11.94□□□□□ -0.5
CLK1-211ENST00000481641 FOXA3P55318 350 aaPredicted RBP11.94□□□□□ -0.5
CLK1-211ENST00000481641 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
CLK1-211ENST00000481641 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
CLK1-211ENST00000481641 AMTP48728 403 aa11.93□□□□□ -0.5
CLK1-211ENST00000481641 COTL1Q14019 142 aa11.93□□□□□ -0.5
CLK1-211ENST00000481641 GTSF1Q8WW33 167 aa11.93□□□□□ -0.5
CLK1-211ENST00000481641 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
CLK1-211ENST00000481641 PKHD1L1Q86WI1 4243 aa11.93□□□□□ -0.5
CLK1-211ENST00000481641 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
CLK1-211ENST00000481641 UBE2L6O14933 153 aa11.92□□□□□ -0.5
CLK1-211ENST00000481641 TAGLN2P37802 199 aaKnown RBP11.92□□□□□ -0.5
CLK1-211ENST00000481641 SDIM1Q6ZPB5 146 aa11.92□□□□□ -0.5
CLK1-211ENST00000481641 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
CLK1-211ENST00000481641 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
CLK1-211ENST00000481641 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
CLK1-211ENST00000481641 Q6ZNX1 250 aa11.91□□□□□ -0.5
CLK1-211ENST00000481641 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
CLK1-211ENST00000481641 SLPIP03973 132 aa11.9□□□□□ -0.5
CLK1-211ENST00000481641 RPL37AP61513 92 aaKnown RBP11.9□□□□□ -0.5
CLK1-211ENST00000481641 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
CLK1-211ENST00000481641 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
CLK1-211ENST00000481641 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
CLK1-211ENST00000481641 GATCO43716 136 aaKnown RBP11.88□□□□□ -0.51
CLK1-211ENST00000481641 CEBPGP53567 150 aa11.88□□□□□ -0.51
CLK1-211ENST00000481641 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
CLK1-211ENST00000481641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
CLK1-211ENST00000481641 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
CLK1-211ENST00000481641 AKAP14Q86UN6 197 aa11.87□□□□□ -0.51
CLK1-211ENST00000481641 GAGE12HA6NDE8 117 aa11.86□□□□□ -0.51
CLK1-211ENST00000481641 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
CLK1-211ENST00000481641 BLOC1S1P78537 153 aa11.86□□□□□ -0.51
CLK1-211ENST00000481641 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
CLK1-211ENST00000481641 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
CLK1-211ENST00000481641 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
CLK1-211ENST00000481641 GAS8-AS1O95177 125 aa11.84□□□□□ -0.51
CLK1-211ENST00000481641 AMMECR1LQ6DCA0 310 aa11.84□□□□□ -0.51
CLK1-211ENST00000481641 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
CLK1-211ENST00000481641 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
CLK1-211ENST00000481641 C15orf56Q8N910 161 aa11.84□□□□□ -0.51
CLK1-211ENST00000481641 LYPD6BQ8NI32 183 aa11.84□□□□□ -0.51
CLK1-211ENST00000481641 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
CLK1-211ENST00000481641 SDHAF1A6NFY7 115 aa11.83□□□□□ -0.52
CLK1-211ENST00000481641 A8MWL6 223 aa11.83□□□□□ -0.52
CLK1-211ENST00000481641 OXTP01178 125 aa11.83□□□□□ -0.52
CLK1-211ENST00000481641 DPH3Q96FX2 82 aa11.83□□□□□ -0.52
CLK1-211ENST00000481641 NCR2O95944 276 aa11.82□□□□□ -0.52
CLK1-211ENST00000481641 APCSP02743 223 aa11.82□□□□□ -0.52
CLK1-211ENST00000481641 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
CLK1-211ENST00000481641 HIGD2BQ4VC39 106 aa11.82□□□□□ -0.52
CLK1-211ENST00000481641 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
CLK1-211ENST00000481641 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
CLK1-211ENST00000481641 FGF6P10767 208 aa11.81□□□□□ -0.52
CLK1-211ENST00000481641 CHCHD10Q8WYQ3 142 aaPredicted RBP11.81□□□□□ -0.52
CLK1-211ENST00000481641 A0A087WYN8 130 aa11.8□□□□□ -0.52
CLK1-211ENST00000481641 PMCHP20382 165 aa11.8□□□□□ -0.52
CLK1-211ENST00000481641 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
CLK1-211ENST00000481641 EIF5A2Q9GZV4 153 aaKnown RBP11.8□□□□□ -0.52
CLK1-211ENST00000481641 CT83Q5H943 113 aa11.79□□□□□ -0.52
CLK1-211ENST00000481641 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
CLK1-211ENST00000481641 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
CLK1-211ENST00000481641 SMIM7Q9BQ49 75 aa11.79□□□□□ -0.52
CLK1-211ENST00000481641 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
CLK1-211ENST00000481641 I3L3M4 83 aa11.78□□□□□ -0.52
CLK1-211ENST00000481641 SPACA4Q8TDM5 124 aa11.78□□□□□ -0.52
CLK1-211ENST00000481641 TMEM242Q9NWH2 141 aa11.78□□□□□ -0.52
CLK1-211ENST00000481641 HIGD1CA8MV81 97 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 H7C423 109 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 TSHBP01222 138 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 COX6A2Q02221 97 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
CLK1-211ENST00000481641 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
CLK1-211ENST00000481641 RPS10P46783 165 aaKnown RBP11.76□□□□□ -0.53
CLK1-211ENST00000481641 FOXI1Q12951 378 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 FAM210AQ96ND0 272 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
CLK1-211ENST00000481641 HMCN2Q8NDA2 5059 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 ESDP10768 282 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 RAB4AP20338 218 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 XCL1P47992 114 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 SERTAD4-AS1Q5TG53 156 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
CLK1-211ENST00000481641 SMKR1H3BMG3 65 aa11.74□□□□□ -0.53
CLK1-211ENST00000481641 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
CLK1-211ENST00000481641 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
CLK1-211ENST00000481641 OSTCQ9NRP0 149 aa11.74□□□□□ -0.53
CLK1-211ENST00000481641 GVQW2A0A096LPI5 108 aaPredicted RBP11.73□□□□□ -0.53
CLK1-211ENST00000481641 IGKV2-24A0A0C4DH68 120 aa11.73□□□□□ -0.53
CLK1-211ENST00000481641 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms