RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ZNF682O95780 498 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 TMEM254Q8TBM7 123 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 TSKUQ8WUA8 353 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 FAM172AQ8WUF8 416 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 ZHX1-C8orf76Q96EF9 292 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 TEX37Q96LM6 180 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 TMEM14CQ9P0S9 112 aa0.42□□□□□ -2.34
COPA-204ENST00000481522 TRBV6-4A0A1B0GX49 114 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 OR2T8A6NH00 312 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 CYB5BO43169 146 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 RPP14O95059 124 aaKnown RBP0.41□□□□□ -2.34
COPA-204ENST00000481522 DHFRP00374 187 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 C8GP07360 202 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 SMIM17P0DL12 118 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
COPA-204ENST00000481522 CEBPGP53567 150 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 OR2T2Q6IF00 324 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 SLAMF6Q96DU3 332 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 ADAT3Q96EY9 351 aaPredicted RBP0.41□□□□□ -2.34
COPA-204ENST00000481522 UBE2D4Q9Y2X8 147 aa0.41□□□□□ -2.34
COPA-204ENST00000481522 PPP5D1E7EU14 171 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 GADD45GO95257 159 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 RPL22P35268 128 aaKnown RBP0.4□□□□□ -2.35
COPA-204ENST00000481522 EIF5AP63241 154 aaKnown RBP0.4□□□□□ -2.35
COPA-204ENST00000481522 HIST1H3AP68431 136 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 EDDM3AQ14507 147 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 LINC01556Q5JQF7 62 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 OR2T35Q8NGX2 323 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 GPER1Q99527 375 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 PARD6GQ9BYG4 376 aaPredicted RBP0.4□□□□□ -2.35
COPA-204ENST00000481522 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.4□□□□□ -2.35
COPA-204ENST00000481522 UQCC1Q9NVA1 299 aa0.4□□□□□ -2.35
COPA-204ENST00000481522 C9orf92A6NGG3 77 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 SMIM9A6NGZ8 99 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 PDE6DO43924 150 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 SERPINA1P01009 418 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 RPS17P08708 135 aaKnown RBP0.39□□□□□ -2.35
COPA-204ENST00000481522 DYNLT1P63172 113 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 REEP5Q00765 189 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 LYRM7Q5U5X0 104 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 C4orf33Q8N1A6 199 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 FAM24BQ8N5W8 94 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 LEAP2Q969E1 77 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 PRADC1Q9BSG0 188 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 FAM103A1Q9BTL3 118 aaKnown RBP0.39□□□□□ -2.35
COPA-204ENST00000481522 RNASE7Q9H1E1 156 aaKnown RBP0.39□□□□□ -2.35
COPA-204ENST00000481522 TMEM133Q9H2Q1 129 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 PRELID3BQ9Y3B1 194 aa0.39□□□□□ -2.35
COPA-204ENST00000481522 IGHV1-58A0A0C4DH39 117 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 LOC107986453A0A1B0GWG9 222 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 H3BNG1 76 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 NUPR1O60356 82 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 IGHV3-30P01768 117 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 IGHV3-33P01772 117 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 IGHV3-30-5P0DP03 117 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 DEFB131AP59861 70 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 HAGHLQ6PII5 290 aaPredicted RBP0.38□□□□□ -2.35
COPA-204ENST00000481522 C2orf82Q6UX34 121 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 OR51A2Q8NGJ7 313 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 TP53RKQ96S44 253 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 TLNRD1Q9H1K6 362 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 C10orf95Q9H7T3 257 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 TAS2R7Q9NYW3 318 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 GLTPQ9NZD2 209 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 ORMDL1Q9P0S3 153 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 NUBP2Q9Y5Y2 271 aa0.38□□□□□ -2.35
COPA-204ENST00000481522 TIMM17BO60830 172 aa0.37□□□□□ -2.35
COPA-204ENST00000481522 MT-ND6P03923 174 aa0.37□□□□□ -2.35
COPA-204ENST00000481522 Q8IYB0 196 aa0.37□□□□□ -2.35
COPA-204ENST00000481522 SPRR2GQ9BYE4 73 aa0.37□□□□□ -2.35
COPA-204ENST00000481522 TRGV10A0A0A0MS01 117 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 LOC285095A0A1B0GVY8 99 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 RNASE4P34096 147 aaKnown RBP0.36□□□□□ -2.35
COPA-204ENST00000481522 RANP62826 216 aaKnown RBP0.36□□□□□ -2.35
COPA-204ENST00000481522 KRR1Q13601 381 aaKnown RBP0.36□□□□□ -2.35
COPA-204ENST00000481522 TMEM97Q5BJF2 176 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 UNQ5815/PRO19632Q6UWF5 114 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 OR8J2Q8NGG1 315 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 ATP6V0E2Q8NHE4 81 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 IDI2-AS1Q9NZ38 188 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 PYCARDQ9ULZ3 195 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 TNFSF18Q9UNG2 199 aa0.36□□□□□ -2.35
COPA-204ENST00000481522 IQCF6A8MYZ5 107 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 OOSP1A8MZH6 123 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 RBP4P02753 201 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 TCRBP04435 133 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 RPS3P23396 243 aaKnown RBP eCLIP0.35□□□□□ -2.35
COPA-204ENST00000481522 SRIP30626 198 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 SDC4P31431 198 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 RPL37P61927 97 aaKnown RBP0.35□□□□□ -2.35
COPA-204ENST00000481522 RPL19P84098 196 aaKnown RBP0.35□□□□□ -2.35
COPA-204ENST00000481522 LINC00052Q96N35 136 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 YPEL2Q96QA6 119 aa0.35□□□□□ -2.35
COPA-204ENST00000481522 A8MWV9 139 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 KDELR1P24390 212 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 LSM6P62312 80 aaKnown RBP0.34□□□□□ -2.36
COPA-204ENST00000481522 COX6A2Q02221 97 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 TMED2Q15363 201 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 KRTAP26-1Q6PEX3 210 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 C4orf22Q6V702 233 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms