RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CHAC1Q9BUX1 264 aa7.51□□□□□ -1.21
CCM2-213ENST00000480658 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
CCM2-213ENST00000480658 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
CCM2-213ENST00000480658 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
CCM2-213ENST00000480658 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
CCM2-213ENST00000480658 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
CCM2-213ENST00000480658 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
CCM2-213ENST00000480658 OCC1Q8TAD7 63 aa7.5□□□□□ -1.21
CCM2-213ENST00000480658 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
CCM2-213ENST00000480658 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 K7EN84 100 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 PPP1R17O96001 155 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
CCM2-213ENST00000480658 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 FAM74A3Q4VXF1 159 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 SMIM7Q9BQ49 75 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 PKIGQ9Y2B9 76 aa7.49□□□□□ -1.21
CCM2-213ENST00000480658 APCSP02743 223 aa7.48□□□□□ -1.21
CCM2-213ENST00000480658 CEBPGP53567 150 aa7.48□□□□□ -1.21
CCM2-213ENST00000480658 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
CCM2-213ENST00000480658 SCXQ7RTU7 201 aa7.48□□□□□ -1.21
CCM2-213ENST00000480658 ZNF727A8MUV8 499 aa7.47□□□□□ -1.21
CCM2-213ENST00000480658 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
CCM2-213ENST00000480658 TSKUQ8WUA8 353 aa7.47□□□□□ -1.21
CCM2-213ENST00000480658 BTF3L4Q96K17 158 aa7.47□□□□□ -1.21
CCM2-213ENST00000480658 SMDT1Q9H4I9 107 aa7.47□□□□□ -1.21
CCM2-213ENST00000480658 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
CCM2-213ENST00000480658 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 A0A1B0GUT8 65 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 I3L3M4 83 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 GATD1Q8NB37 220 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 GTSF1Q8WW33 167 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 TMEM101Q96IK0 257 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 OSTCQ9NRP0 149 aa7.46□□□□□ -1.22
CCM2-213ENST00000480658 hDV102S1A0JD36 115 aa7.45□□□□□ -1.22
CCM2-213ENST00000480658 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
CCM2-213ENST00000480658 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
CCM2-213ENST00000480658 C20orf203Q8NBC4 194 aa7.45□□□□□ -1.22
CCM2-213ENST00000480658 A0A1B0GW15 77 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 TCAPO15273 167 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 PRSS1P07477 247 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 HAMPP81172 84 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 RIGQ13278 110 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 CIRBP-AS1Q8TBR5 109 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
CCM2-213ENST00000480658 IGLV10-54A0A075B6I4 117 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 IGHV3-64A0A075B6Q5 118 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 J3QL48 77 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 PMCHP20382 165 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 RNASEKQ6P5S7 137 aaKnown RBP7.43□□□□□ -1.22
CCM2-213ENST00000480658 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
CCM2-213ENST00000480658 IGLV4-60A0A075B6I1 120 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 CCL25O15444 150 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 S100A8P05109 93 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 PEA15Q15121 130 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 TMEM241Q24JQ0 296 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 KRTAP26-1Q6PEX3 210 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 NAT8Q9UHE5 227 aa7.42□□□□□ -1.22
CCM2-213ENST00000480658 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
CCM2-213ENST00000480658 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 SRP19P09132 144 aaKnown RBP7.41□□□□□ -1.22
CCM2-213ENST00000480658 FGF6P10767 208 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 LINC01620Q4KN68 170 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
CCM2-213ENST00000480658 KIR2DL4Q99706 377 aa7.41□□□□□ -1.22
CCM2-213ENST00000480658 DMBT1Q9UGM3 2413 aaPredicted RBP7.4□□□□□ -1.22
CCM2-213ENST00000480658 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
CCM2-213ENST00000480658 MRPL52Q86TS9 123 aaKnown RBP7.4□□□□□ -1.22
CCM2-213ENST00000480658 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
CCM2-213ENST00000480658 LINC00474Q9P2X8 69 aa7.4□□□□□ -1.22
CCM2-213ENST00000480658 LINC00862A6NCI5 91 aa7.39□□□□□ -1.23
CCM2-213ENST00000480658 KRTAP29-1A8MX34 341 aaPredicted RBP7.39□□□□□ -1.23
CCM2-213ENST00000480658 VCYO14598 125 aa7.39□□□□□ -1.23
CCM2-213ENST00000480658 OXTP01178 125 aa7.39□□□□□ -1.23
CCM2-213ENST00000480658 FCER1GP30273 86 aa7.39□□□□□ -1.23
CCM2-213ENST00000480658 RPL37AP61513 92 aaKnown RBP7.39□□□□□ -1.23
CCM2-213ENST00000480658 SS18Q15532 418 aa7.39□□□□□ -1.23
CCM2-213ENST00000480658 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
CCM2-213ENST00000480658 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
CCM2-213ENST00000480658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
CCM2-213ENST00000480658 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
CCM2-213ENST00000480658 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
CCM2-213ENST00000480658 GAGE12HA6NDE8 117 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 F8W036 122 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 RAB4AP20338 218 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 SUMO2P61956 95 aaKnown RBP7.38□□□□□ -1.23
CCM2-213ENST00000480658 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms