RNA–Protein interactions for RNA: ENST00000480126.5

STX1A-208, Transcript of syntaxin 1A, human

TSL 5

Gene STX1A, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STX1A-208	ENST00000480126	MED9	Q9NWA0	146 aa		10.13	□□□□□ -0.79
STX1A-208	ENST00000480126	PDE6D	O43924	150 aa		10.12	□□□□□ -0.79
STX1A-208	ENST00000480126	C9orf62	Q8N4C0	152 aa		10.12	□□□□□ -0.79
STX1A-208	ENST00000480126	PLA2G2D	Q9UNK4	145 aa		10.12	□□□□□ -0.79
STX1A-208	ENST00000480126	TEX46	H3BTG2	121 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	CHTF8	P0CG12	524 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	CTRL	P40313	264 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	AMT	P48728	403 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	SULT1A2	P50226	295 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	EIF5AL1	Q6IS14	154 aa	Known RBP	10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	WDR73	Q6P4I2	378 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	NUDT10	Q8NFP7	164 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	NUDT11	Q96G61	164 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	AP5S1	Q9NUS5	200 aa		10.11	□□□□□ -0.79
STX1A-208	ENST00000480126	IGHV3-64	A0A075B6Q5	118 aa		10.1	□□□□□ -0.79
STX1A-208	ENST00000480126	UBE2L6	O14933	153 aa		10.1	□□□□□ -0.79
STX1A-208	ENST00000480126	BCL2	P10415	239 aa		10.1	□□□□□ -0.79
STX1A-208	ENST00000480126	COTL1	Q14019	142 aa		10.1	□□□□□ -0.79
STX1A-208	ENST00000480126	BIN3	Q9NQY0	253 aa		10.1	□□□□□ -0.79
STX1A-208	ENST00000480126		A0A087WYN8	130 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	TRAV26-2	A0A0B4J265	109 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	MT1HL1	P0DM35	61 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	TWIST1	Q15672	202 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	GATD1	Q8NB37	220 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	DPH3	Q96FX2	82 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	CNFN	Q9BYD5	112 aa		10.09	□□□□□ -0.79
STX1A-208	ENST00000480126	GAGE12H	A6NDE8	117 aa		10.08	□□□□□ -0.8
STX1A-208	ENST00000480126	C15orf56	Q8N910	161 aa		10.08	□□□□□ -0.8
STX1A-208	ENST00000480126	IGKV3OR2-268	A0A0C4DH90	116 aa		10.07	□□□□□ -0.8
STX1A-208	ENST00000480126		K7EN84	100 aa		10.07	□□□□□ -0.8
STX1A-208	ENST00000480126	SPACA4	Q8TDM5	124 aa		10.07	□□□□□ -0.8
STX1A-208	ENST00000480126	RNF185	Q96GF1	192 aa		10.07	□□□□□ -0.8
STX1A-208	ENST00000480126	RNASE7	Q9H1E1	156 aa	Known RBP	10.07	□□□□□ -0.8
STX1A-208	ENST00000480126		Q6ZNX1	250 aa		10.06	□□□□□ -0.8
STX1A-208	ENST00000480126		Q6ZRU5	148 aa		10.06	□□□□□ -0.8
STX1A-208	ENST00000480126	RPL39L	Q96EH5	51 aa	Known RBP	10.06	□□□□□ -0.8
STX1A-208	ENST00000480126	RPP21	Q9H633	154 aa	Known RBP	10.06	□□□□□ -0.8
STX1A-208	ENST00000480126	FOXA3	P55318	350 aa	Predicted RBP	10.05	□□□□□ -0.8
STX1A-208	ENST00000480126	CFAP161	Q6P656	301 aa		10.05	□□□□□ -0.8
STX1A-208	ENST00000480126	OCC1	Q8TAD7	63 aa		10.05	□□□□□ -0.8
STX1A-208	ENST00000480126	GTSF1	Q8WW33	167 aa		10.05	□□□□□ -0.8
STX1A-208	ENST00000480126	PLAC8	Q9NZF1	115 aa		10.05	□□□□□ -0.8
STX1A-208	ENST00000480126	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	RPS10	P46783	165 aa	Known RBP	10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	COX6A2	Q02221	97 aa		10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	HIGD2B	Q4VC39	106 aa		10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	AMMECR1L	Q6DCA0	310 aa		10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	SLC51B	Q86UW2	128 aa		10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.03	□□□□□ -0.8
STX1A-208	ENST00000480126	NCR2	O95944	276 aa		10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	TAGLN2	P37802	199 aa	Known RBP	10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	RNASEK	Q6P5S7	137 aa	Known RBP	10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	TCTE3	Q8IZS6	198 aa		10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	PRSS3P2	Q8NHM4	247 aa		10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	TNXB	P22105	4242 aa		10.02	□□□□□ -0.81
STX1A-208	ENST00000480126	SDHAF1	A6NFY7	115 aa		10.01	□□□□□ -0.81
STX1A-208	ENST00000480126	PHOX2A	O14813	284 aa		10.01	□□□□□ -0.81
STX1A-208	ENST00000480126	FGF6	P10767	208 aa		10.01	□□□□□ -0.81
STX1A-208	ENST00000480126	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10	□□□□□ -0.81
STX1A-208	ENST00000480126		H7C423	109 aa		10	□□□□□ -0.81
STX1A-208	ENST00000480126	NDUFS6	O75380	124 aa	Known RBP	10	□□□□□ -0.81
STX1A-208	ENST00000480126	APCS	P02743	223 aa		10	□□□□□ -0.81
STX1A-208	ENST00000480126	MAJIN	Q3KP22	176 aa		10	□□□□□ -0.81
STX1A-208	ENST00000480126	SMIM15	Q7Z3B0	74 aa		10	□□□□□ -0.81
STX1A-208	ENST00000480126	IGKV2-24	A0A0C4DH68	120 aa		9.99	□□□□□ -0.81
STX1A-208	ENST00000480126	FAM231B	A6NCW3	169 aa		9.99	□□□□□ -0.81
STX1A-208	ENST00000480126	FOXI1	Q12951	378 aa		9.99	□□□□□ -0.81
STX1A-208	ENST00000480126	TEX261	Q6UWH6	196 aa		9.99	□□□□□ -0.81
STX1A-208	ENST00000480126	C7orf33	Q8WU49	177 aa		9.99	□□□□□ -0.81
STX1A-208	ENST00000480126	GATC	O43716	136 aa	Known RBP	9.98	□□□□□ -0.81
STX1A-208	ENST00000480126	GAS8-AS1	O95177	125 aa		9.98	□□□□□ -0.81
STX1A-208	ENST00000480126	TRBV6-5	A0A0K0K1A5	114 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126		I3L3M4	83 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126	PMCH	P20382	165 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126	XCL1	P47992	114 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126	FAM231D	Q6ZW35	169 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126	OR5A1	Q8NGJ0	315 aa		9.97	□□□□□ -0.81
STX1A-208	ENST00000480126		A0A096LNI7	61 aa		9.96	□□□□□ -0.82
STX1A-208	ENST00000480126		A8MWL6	223 aa		9.96	□□□□□ -0.82
STX1A-208	ENST00000480126	TMEM250	H0YL14	139 aa		9.96	□□□□□ -0.82
STX1A-208	ENST00000480126	ZNF25	P17030	456 aa	Predicted RBP	9.96	□□□□□ -0.82
STX1A-208	ENST00000480126	STPG4	Q8N801	248 aa		9.96	□□□□□ -0.82
STX1A-208	ENST00000480126	LINC00959	A0A1B0GUT2	108 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	TSHB	P01222	138 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	ESD	P10768	282 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	PRR3	P79522	188 aa	Known RBP	9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	LYPD6B	Q8NI32	183 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	LINC00526	Q96FQ7	95 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	TMEM242	Q9NWH2	141 aa		9.95	□□□□□ -0.82
STX1A-208	ENST00000480126	LRP2	P98164	4655 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	CCL25	O15444	150 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	CT83	Q5H943	113 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	TMEM101	Q96IK0	257 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	BTF3L4	Q96K17	158 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	ST20	Q9HBF5	79 aa		9.94	□□□□□ -0.82
STX1A-208	ENST00000480126	ALKAL2	Q6UX46	152 aa		9.93	□□□□□ -0.82
STX1A-208	ENST00000480126	IGHV1-58	A0A0C4DH39	117 aa		9.92	□□□□□ -0.82
STX1A-208	ENST00000480126	CEBPG	P53567	150 aa		9.92	□□□□□ -0.82

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