RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TRAV25A0A0B4J276 109 aa10.8□□□□□ -0.68
COL20A1-206ENST00000479501 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
COL20A1-206ENST00000479501 CITED2Q99967 270 aaPredicted RBP10.79□□□□□ -0.68
COL20A1-206ENST00000479501 APOC4P55056 127 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 LRRC75A-AS1Q8N1F1 130 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 CLEC2BQ92478 149 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 J3KT08 172 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
COL20A1-206ENST00000479501 H0YGX0 51 aa10.78□□□□□ -0.68
COL20A1-206ENST00000479501 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
COL20A1-206ENST00000479501 LGALS9O00182 355 aa10.78□□□□□ -0.68
COL20A1-206ENST00000479501 IGKV2D-26A0A0A0MRZ7 120 aa10.78□□□□□ -0.68
COL20A1-206ENST00000479501 FN1P02751 2386 aaKnown RBP10.78□□□□□ -0.68
COL20A1-206ENST00000479501 LINC00310P59036 64 aa10.77□□□□□ -0.69
COL20A1-206ENST00000479501 C5orf38Q86SI9 138 aa10.77□□□□□ -0.69
COL20A1-206ENST00000479501 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
COL20A1-206ENST00000479501 TNRC6BQ9UPQ9 1833 aaKnown RBP10.77□□□□□ -0.69
COL20A1-206ENST00000479501 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
COL20A1-206ENST00000479501 ZNF462Q96JM2 2506 aa10.77□□□□□ -0.69
COL20A1-206ENST00000479501 DNAJC9-AS1A6NH13 148 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 Q6ZS46 218 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 TET2Q6N021 2002 aaPredicted RBP10.76□□□□□ -0.69
COL20A1-206ENST00000479501 POLQO75417 2590 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 A0A096LPF7 62 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
COL20A1-206ENST00000479501 TMEM258P61165 79 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 C1orf43Q9BWL3 253 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 XCL1P47992 114 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
COL20A1-206ENST00000479501 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 U3KQK5 164 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 CLPSL1A2RUU4 121 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 MAP6D1Q9H9H5 199 aa10.76□□□□□ -0.69
COL20A1-206ENST00000479501 PSMB8P28062 276 aa10.75□□□□□ -0.69
COL20A1-206ENST00000479501 WFDC11Q8NEX6 87 aa10.75□□□□□ -0.69
COL20A1-206ENST00000479501 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
COL20A1-206ENST00000479501 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
COL20A1-206ENST00000479501 CLPSL2Q6UWE3 100 aa10.75□□□□□ -0.69
COL20A1-206ENST00000479501 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 MTORP42345 2549 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 DOPEY1Q5JWR5 2465 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 K7EQD1 137 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 ANGP03950 147 aaKnown RBP10.74□□□□□ -0.69
COL20A1-206ENST00000479501 OPRPNQ99935 248 aaPredicted RBP10.74□□□□□ -0.69
COL20A1-206ENST00000479501 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 RAI1Q7Z5J4 1906 aaPredicted RBP10.74□□□□□ -0.69
COL20A1-206ENST00000479501 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
COL20A1-206ENST00000479501 AVPP01185 164 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 MRGPRG-AS1Q2M3A8 158 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
COL20A1-206ENST00000479501 DAZ2Q13117 558 aaKnown RBP10.73□□□□□ -0.69
COL20A1-206ENST00000479501 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
COL20A1-206ENST00000479501 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
COL20A1-206ENST00000479501 PCSK5Q92824 1860 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 LINC00643Q86TS7 51 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
COL20A1-206ENST00000479501 TEX49A0A1B0GTD5 131 aa10.72□□□□□ -0.69
COL20A1-206ENST00000479501 IGLV1-40P01703 118 aa10.72□□□□□ -0.69
COL20A1-206ENST00000479501 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
COL20A1-206ENST00000479501 PRR9Q5T870 116 aa10.72□□□□□ -0.69
COL20A1-206ENST00000479501 A0A0C4DFX4 3053 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 LECT2O14960 151 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 NKAPP1Q8N9T2 125 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
COL20A1-206ENST00000479501 A0A0J9YY99 117 aa10.71□□□□□ -0.7
COL20A1-206ENST00000479501 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
COL20A1-206ENST00000479501 Q6ZSV7 163 aa10.7□□□□□ -0.7
COL20A1-206ENST00000479501 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 P0DMU3 169 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 FAM231AP0DMU4 169 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 FAM231CP0DMU5 169 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 EPG5Q9HCE0 2579 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 GYPEP15421 78 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
COL20A1-206ENST00000479501 RNASE3P12724 160 aaKnown RBP10.68□□□□□ -0.7
COL20A1-206ENST00000479501 TMEM263Q8WUH6 116 aaKnown RBP10.68□□□□□ -0.7
COL20A1-206ENST00000479501 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 UNC80Q8N2C7 3258 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
COL20A1-206ENST00000479501 CEMP1Q6PRD7 247 aaPredicted RBP10.67□□□□□ -0.7
COL20A1-206ENST00000479501 NRACQ8N912 160 aa10.67□□□□□ -0.7
COL20A1-206ENST00000479501 URB1-AS1Q96HZ7 61 aa10.67□□□□□ -0.7
COL20A1-206ENST00000479501 Q8N976 141 aa10.67□□□□□ -0.7
COL20A1-206ENST00000479501 KLLNB2CW77 178 aa10.67□□□□□ -0.7
COL20A1-206ENST00000479501 ATP5G1P05496 136 aa10.67□□□□□ -0.7
COL20A1-206ENST00000479501 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms