RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 PLAC8L1A1L4L8 177 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 K7EMI3 77 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 DPM2O94777 84 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 IGKCP01834 107 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 COX8AP10176 69 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 RIPPLY3P57055 190 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 NEXN-AS1Q8NBZ9 246 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 OR4C5Q8NGB2 326 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 TMEM263Q8WUH6 116 aaKnown RBP2.96□□□□□ -1.94
USP25-208ENST00000478932 PHLDA1Q8WV24 401 aaPredicted RBP2.96□□□□□ -1.94
USP25-208ENST00000478932 BAALCQ8WXS3 180 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 FAM110AQ9BQ89 295 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 SPXQ9BT56 116 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 ZMAT4Q9H898 229 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 COL7A1Q02388 2944 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 TRGV2A0A075B6R0 118 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 TRAV8-6A0A0B4J262 113 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 GAGE12BA1L429 117 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 H7C1H1 209 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 I3L3M4 83 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 GAGE7O76087 117 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 GAGE12FP0CL80 117 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 GAGE12GP0CL81 117 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 GAGE12IP0CL82 117 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 CMC4P56277 68 aaPredicted RBP2.96□□□□□ -1.94
USP25-208ENST00000478932 RRN3P1Q2M238 152 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 LBHQ53QV2 105 aaPredicted RBP2.96□□□□□ -1.94
USP25-208ENST00000478932 SAMD5Q5TGI4 173 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 Q6ZVH6 145 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 LURAP1LQ8IV03 231 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 C2orf88Q9BSF0 95 aa2.96□□□□□ -1.94
USP25-208ENST00000478932 MRPS16Q9Y3D3 137 aaKnown RBP2.96□□□□□ -1.94
USP25-208ENST00000478932 F8VRH5 84 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 DEFB4AO15263 64 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 DEFB130BP0DP73 79 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 DEFB130AP0DP74 79 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 FGF6P10767 208 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 RPL32P62910 135 aaKnown RBP2.95□□□□□ -1.94
USP25-208ENST00000478932 RNASE13Q5GAN3 156 aaKnown RBP2.95□□□□□ -1.94
USP25-208ENST00000478932 SLC25A29Q8N8R3 303 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 C20orf203Q8NBC4 194 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 ZNRF2Q8NHG8 242 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 LINC00467Q9BRT7 94 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 C1QTNF4Q9BXJ3 329 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 CHTOPQ9Y3Y2 248 aaKnown RBP2.95□□□□□ -1.94
USP25-208ENST00000478932 PLNP26678 52 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 INSL3P51460 131 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 TNP2Q05952 138 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 KRTAP24-1Q3LI83 254 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 PIK3CD-AS1Q5SR53 167 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 C9orf66Q5T8R8 295 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 C2orf91Q6ZV80 131 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 BOD1L2Q8IYS8 172 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 CST9LQ9H4G1 147 aa2.95□□□□□ -1.94
USP25-208ENST00000478932 TRAV12-1A0A0B4J245 112 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 C11orf86A6NJI1 115 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 RHODO00212 210 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 RS1O15537 224 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 G0S2P27469 103 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 DAZ2Q13117 558 aaKnown RBP2.94□□□□□ -1.94
USP25-208ENST00000478932 DEFB135Q30KP9 77 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 KRTAP19-1Q8IUB9 90 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 MAPKAPK5-AS1Q8N8E1 139 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 IL17DQ8TAD2 202 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 MDFIQ99750 246 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 IGLV4-69A0A075B6H9 119 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 TRBV7-3A0A075B6L6 115 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.94□□□□□ -1.94
USP25-208ENST00000478932 LOC100131303A0A0U1RQF7 123 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 IGKV2-29A2NJV5 120 aaPredicted RBP2.94□□□□□ -1.94
USP25-208ENST00000478932 K7EP13 123 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 PMVKQ15126 192 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 COL5A1-AS1Q5SY13 56 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 Q8N3U1 123 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 WFDC9Q8NEX5 89 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 PTH2Q96A98 100 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 C16orf74Q96GX8 76 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 VCX2Q9H322 139 aa2.94□□□□□ -1.94
USP25-208ENST00000478932 TRBV25-1A0A075B6N4 114 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 GAGE12JA6NER3 117 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 ZNF25P17030 456 aaPredicted RBP2.93□□□□□ -1.94
USP25-208ENST00000478932 GAGE1Q13065 139 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 GAGE4Q13068 117 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 GAGE5Q13069 117 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 COTL1Q14019 142 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 GAGE13Q4V321 117 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 BVES-AS1Q5T3Y7 98 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 C3orf56Q8N813 242 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 TIMM17AQ99595 171 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 IGLV4-3A0A075B6K6 122 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 TRGV4A0A0C4DH28 118 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 A0A0J9YXV3 536 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 LINC00694P0DN24 101 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 RHOHQ15669 191 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 C12orf54Q6X4T0 127 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 NTM-AS1Q6ZSK4 140 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 PRIMA1Q86XR5 153 aa2.93□□□□□ -1.94
USP25-208ENST00000478932 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms