RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PPP1R2P9O14990 202 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 MT-ND4LP03901 98 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 AMN1Q8IY45 258 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 CHCHD5Q9BSY4 110 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 TMEM191AQ9H0A3 160 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 A0A087WX48 190 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 LINC00862A6NCI5 91 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 TMEM262E9PQX1 116 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 NCR2O95944 276 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 KCNIP4Q6PIL6 250 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 NIT1Q86X76 327 aa4.66□□□□□ -1.66
BRCA1-215ENST00000478531 GEMIN7Q9H840 131 aaKnown RBP4.66□□□□□ -1.66
BRCA1-215ENST00000478531 TRBV25-1A0A075B6N4 114 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 SMKR1H3BMG3 65 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 K7EP13 123 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 GAS8-AS1O95177 125 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 HBBP68871 147 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 RNF185Q96GF1 192 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 SEC11CQ9BY50 192 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 DNAH5Q8TE73 4624 aa4.65□□□□□ -1.66
BRCA1-215ENST00000478531 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
BRCA1-215ENST00000478531 GAGE6Q13070 117 aa4.65□□□□□ -1.67
BRCA1-215ENST00000478531 MPV17L2Q567V2 206 aa4.65□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM97Q5BJF2 176 aa4.65□□□□□ -1.67
BRCA1-215ENST00000478531 IGHV1-24A0A0C4DH33 117 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 A0A1B0GW15 77 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 SDHAF1A6NFY7 115 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 IBA57-AS1B1ANH7 110 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM238C9JI98 176 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 PSCAO43653 123 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 S100A8P05109 93 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 AMTP48728 403 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 Q6ZRN7 208 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-215ENST00000478531 NFE4Q86UQ8 179 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 FRZBQ92765 325 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 MRAP2Q96G30 205 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 ST20Q9HBF5 79 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 KLK12Q9UKR0 248 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 A0A1B0GXF2 115 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 UBE2L6O14933 153 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 ANGP03950 147 aaKnown RBP4.64□□□□□ -1.67
BRCA1-215ENST00000478531 LAGE3Q14657 143 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 IQCJQ1A5X6 159 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 MRPL51Q4U2R6 128 aaKnown RBP4.64□□□□□ -1.67
BRCA1-215ENST00000478531 FAM104BQ5XKR9 115 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 ATP5L2Q7Z4Y8 100 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 Q8N976 141 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM243Q9BU79 118 aa4.64□□□□□ -1.67
BRCA1-215ENST00000478531 GAGE10A6NGK3 116 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 CRPP02741 224 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 APCSP02743 223 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 CLPSL2Q6UWE3 100 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 UBE2WQ96B02 151 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 CHCHD7Q9BUK0 85 aa4.63□□□□□ -1.67
BRCA1-215ENST00000478531 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
BRCA1-215ENST00000478531 LINC00587B1AMM8 73 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 D6R8Y8 96 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 I3L3M4 83 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 PMCHP20382 165 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 CKS2P33552 79 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 PKIAP61925 76 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 ATRAIDQ6UW56 229 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 PACRGQ96M98 296 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM70Q9BUB7 260 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 TMEM242Q9NWH2 141 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 IGKV2D-24A0A075B6R9 120 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-215ENST00000478531 TRAV8-3A0A0A6YYJ7 113 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 TRBV6-5A0A0K0K1A5 114 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 IGKV2-29A2NJV5 120 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-215ENST00000478531 C5orf52A6NGY3 159 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 APOC3P02656 99 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 RBX1P62877 108 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 ELOBQ15370 118 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 C10orf91Q5T1B1 145 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 NRACQ8N912 160 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 CTDSP1Q9GZU7 261 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 RPS10P5Q9NQ39 176 aa4.62□□□□□ -1.67
BRCA1-215ENST00000478531 CARHSP1Q9Y2V2 147 aaKnown RBP4.62□□□□□ -1.67
BRCA1-215ENST00000478531 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 C7orf77A4D0Y5 90 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 PPP1R17O96001 155 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 TSHBP01222 138 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 S100PP25815 95 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
BRCA1-215ENST00000478531 RHEBQ15382 184 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 DGAT2L7PQ6IED9 249 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 LINC00269Q8N2A0 174 aa4.61□□□□□ -1.67
BRCA1-215ENST00000478531 LECT2O14960 151 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 NPYP01303 97 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 FCER1GP30273 86 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.67
BRCA1-215ENST00000478531 AMMECR1LQ6DCA0 310 aa4.6□□□□□ -1.67
BRCA1-215ENST00000478531 RNASEKQ6P5S7 137 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms