RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 STHQ8IWL8 128 aa8.86□□□□□ -0.99
PTPRF-212ENST00000477970 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
PTPRF-212ENST00000477970 HIST1H4GQ99525 98 aa8.86□□□□□ -0.99
PTPRF-212ENST00000477970 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 CITED2Q99967 270 aaPredicted RBP8.85□□□□□ -0.99
PTPRF-212ENST00000477970 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 ZNF815PA8K554 130 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 COTL1Q14019 142 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 SAMD5Q5TGI4 173 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
PTPRF-212ENST00000477970 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
PTPRF-212ENST00000477970 FABP2P12104 132 aa8.84□□□□□ -0.99
PTPRF-212ENST00000477970 C1orf158Q8N1D5 194 aa8.84□□□□□ -0.99
PTPRF-212ENST00000477970 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
PTPRF-212ENST00000477970 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
PTPRF-212ENST00000477970 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
PTPRF-212ENST00000477970 LEPROTO15243 131 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 GAGE12BA1L429 117 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 FAM104AQ969W3 186 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 NHP2Q9NX24 153 aaKnown RBP8.83□□□□□ -1
PTPRF-212ENST00000477970 IGLV1-51P01701 117 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 RNASE8Q8TDE3 154 aaKnown RBP8.83□□□□□ -1
PTPRF-212ENST00000477970 RAB37Q96AX2 223 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
PTPRF-212ENST00000477970 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
PTPRF-212ENST00000477970 VCX2Q9H322 139 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 C2CD3Q4AC94 2353 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 A0A0J9YY99 117 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 IGLL5B9A064 214 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 HTN1P15515 57 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 PROK1P58294 105 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 Q6ZSN1 163 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
PTPRF-212ENST00000477970 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
PTPRF-212ENST00000477970 TIMM21Q9BVV7 248 aa8.82□□□□□ -1
PTPRF-212ENST00000477970 CIDEAO60543 219 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 TMEM170BQ5T4T1 132 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 A0A1W2PRX2 142 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 J3QQQ9 107 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 UBE2D1P51668 147 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 MRPL16Q9NX20 251 aaKnown RBP8.81□□□□□ -1
PTPRF-212ENST00000477970 UBE2D4Q9Y2X8 147 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 MTORP42345 2549 aa8.81□□□□□ -1
PTPRF-212ENST00000477970 TLN2Q9Y4G6 2542 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 K7ERJ3 54 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 IGHV3-73A0A0B4J1V6 119 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
PTPRF-212ENST00000477970 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 XCL2Q9UBD3 114 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 PRM2P04554 102 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 AZU1P20160 251 aa8.8□□□□□ -1
PTPRF-212ENST00000477970 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -1
PTPRF-212ENST00000477970 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 RRN3P1Q2M238 152 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
PTPRF-212ENST00000477970 LGALS3P17931 250 aaKnown RBP8.79□□□□□ -1
PTPRF-212ENST00000477970 RBX1P62877 108 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 EMP1P54849 157 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 OCIAD2Q56VL3 154 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 HIST2H2BDQ6DRA6 164 aa8.79□□□□□ -1
PTPRF-212ENST00000477970 CUBNO60494 3623 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 GIG44P09565 113 aaPredicted RBP8.78□□□□□ -1
PTPRF-212ENST00000477970 KRTAP24-1Q3LI83 254 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 ZNF479Q96JC4 524 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 SETD2Q9BYW2 2564 aaPredicted RBP8.78□□□□□ -1
PTPRF-212ENST00000477970 SAP30O75446 220 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 NDUFA11Q86Y39 141 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 C11orf44Q8N8P7 122 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 C16orf74Q96GX8 76 aa8.78□□□□□ -1
PTPRF-212ENST00000477970 IGHV3-30P01768 117 aa8.77□□□□□ -1
PTPRF-212ENST00000477970 IGHV3-30-5P0DP03 117 aa8.77□□□□□ -1
PTPRF-212ENST00000477970 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
PTPRF-212ENST00000477970 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1.01
PTPRF-212ENST00000477970 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
PTPRF-212ENST00000477970 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
PTPRF-212ENST00000477970 CSDC2Q9Y534 153 aaKnown RBP8.77□□□□□ -1.01
PTPRF-212ENST00000477970 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPRF-212ENST00000477970 MDFIQ99750 246 aa8.76□□□□□ -1.01
PTPRF-212ENST00000477970 SONP18583 2426 aaKnown RBP8.76□□□□□ -1.01
PTPRF-212ENST00000477970 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
PTPRF-212ENST00000477970 K7EQD1 137 aa8.76□□□□□ -1.01
PTPRF-212ENST00000477970 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
PTPRF-212ENST00000477970 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
PTPRF-212ENST00000477970 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
PTPRF-212ENST00000477970 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
PTPRF-212ENST00000477970 Q9UF83 564 aa8.75□□□□□ -1.01
PTPRF-212ENST00000477970 K7ERU9 68 aa8.75□□□□□ -1.01
PTPRF-212ENST00000477970 TIRAPP58753 221 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms