RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TP53TG1Q9Y2A0 90 aa5.72□□□□□ -1.49
VMA21-203ENST00000477649 CHTOPQ9Y3Y2 248 aaKnown RBP5.72□□□□□ -1.49
VMA21-203ENST00000477649 TRBV7-3A0A075B6L6 115 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 TRBV6-4A0A1B0GX49 114 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 TSHBP01222 138 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 COTL1Q14019 142 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 MAJINQ3KP22 176 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 TMEM97Q5BJF2 176 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 BAALCQ8WXS3 180 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 MRPL35Q9NZE8 188 aaKnown RBP5.71□□□□□ -1.5
VMA21-203ENST00000477649 DKK2Q9UBU2 259 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 HHLA3Q9XRX5 114 aa5.71□□□□□ -1.5
VMA21-203ENST00000477649 AGRNO00468 2067 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 FN1P02751 2386 aaKnown RBP5.7□□□□□ -1.5
VMA21-203ENST00000477649 TRGV2A0A075B6R0 118 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 PRSS29PA6NIE9 313 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 K7EQD1 137 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 HERVK_113P61574 105 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 COL5A1-AS1Q5SY13 56 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 LINC00612Q8N6U2 182 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 CST9LQ9H4G1 147 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 NOP10Q9NPE3 64 aaKnown RBP5.7□□□□□ -1.5
VMA21-203ENST00000477649 SORL1Q92673 2214 aa5.7□□□□□ -1.5
VMA21-203ENST00000477649 TEX48A0A1B0GUV7 120 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 PLAC8L1A1L4L8 177 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 LYRM9A8MSI8 78 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 H7C423 109 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 ZC2HC1BQ5TFG8 222 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 Q6ZTI0 123 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 PRADC1Q9BSG0 188 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 SNHG12Q9BXW3 62 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 WFDC10AQ9H1F0 79 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 GTSF1LQ9H1H1 148 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 VCX2Q9H322 139 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 HIGD1BQ9P298 99 aa5.69□□□□□ -1.5
VMA21-203ENST00000477649 NSD1Q96L73 2696 aaPredicted RBP5.69□□□□□ -1.5
VMA21-203ENST00000477649 CUBNO60494 3623 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 IGHV3-73A0A0B4J1V6 119 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 A8MZ25 164 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 P0DMU3 169 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 FAM231AP0DMU4 169 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 FAM231CP0DMU5 169 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 MIFP14174 115 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
VMA21-203ENST00000477649 NEGR1Q7Z3B1 354 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 NFE4Q86UQ8 179 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 STPG4Q8N801 248 aa5.68□□□□□ -1.5
VMA21-203ENST00000477649 CSDC2Q9Y534 153 aaKnown RBP5.68□□□□□ -1.5
VMA21-203ENST00000477649 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 E9PLD3 99 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 PRM2P04554 102 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 FGF6P10767 208 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 NMUP48645 174 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 UBE2D3P61077 147 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 UBE2D2P62837 147 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 SEC11AP67812 179 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 HSD52Q0P140 79 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 KRTAP24-1Q3LI83 254 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 Q6ZSN1 163 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 ZNRF2Q8NHG8 242 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 ZNF479Q96JC4 524 aa5.67□□□□□ -1.5
VMA21-203ENST00000477649 GAGE12BA1L429 117 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 EREGO14944 169 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 GAGE7O76087 117 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 GAGE12FP0CL80 117 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 GAGE12GP0CL81 117 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 GAGE12IP0CL82 117 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
VMA21-203ENST00000477649 EGFEM1PQ0D2K5 195 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 TAL2Q16559 108 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 AMELXQ99217 191 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 CHCHD7Q9BUK0 85 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 X6R8D5 127 aa5.66□□□□□ -1.5
VMA21-203ENST00000477649 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
VMA21-203ENST00000477649 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
VMA21-203ENST00000477649 IGLV4-3A0A075B6K6 122 aa5.65□□□□□ -1.5
VMA21-203ENST00000477649 FAM229AH3BQW9 127 aa5.65□□□□□ -1.5
VMA21-203ENST00000477649 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
VMA21-203ENST00000477649 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
VMA21-203ENST00000477649 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.5
VMA21-203ENST00000477649 WNK1Q9H4A3 2382 aa5.65□□□□□ -1.51
VMA21-203ENST00000477649 A6NDN8 102 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 FHL2Q14192 279 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 PLEKHB2Q96CS7 222 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 RNF183Q96D59 192 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 PRO0255Q9UI72 69 aa5.64□□□□□ -1.51
VMA21-203ENST00000477649 TRBV25-1A0A075B6N4 114 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms