RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 DNAH11Q96DT5 4516 aa8.32□□□□□ -1.08
CLCNKA-205ENST00000477360 IQCJQ1A5X6 159 aa8.32□□□□□ -1.08
CLCNKA-205ENST00000477360 MRPL51Q4U2R6 128 aaKnown RBP8.32□□□□□ -1.08
CLCNKA-205ENST00000477360 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
CLCNKA-205ENST00000477360 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
CLCNKA-205ENST00000477360 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
CLCNKA-205ENST00000477360 A0A087WX48 190 aa8.31□□□□□ -1.08
CLCNKA-205ENST00000477360 PHOX2AO14813 284 aa8.31□□□□□ -1.08
CLCNKA-205ENST00000477360 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
CLCNKA-205ENST00000477360 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
CLCNKA-205ENST00000477360 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
CLCNKA-205ENST00000477360 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
CLCNKA-205ENST00000477360 RMI2Q96E14 147 aa8.3□□□□□ -1.08
CLCNKA-205ENST00000477360 LAMTOR2Q9Y2Q5 125 aa8.3□□□□□ -1.08
CLCNKA-205ENST00000477360 NCR2O95944 276 aa8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 CKS2P33552 79 aa8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 Q0VG73 95 aa8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 ORMDL3Q8N138 153 aa8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 NRACQ8N912 160 aa8.29□□□□□ -1.08
CLCNKA-205ENST00000477360 A0A087WTM6 91 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 IGHV1-24A0A0C4DH33 117 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 PRSS47A8MTI9 375 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 D6R8Y8 96 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 NTM-AS1Q6ZSK4 140 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
CLCNKA-205ENST00000477360 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 A0A1B0GUV1 79 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 SDHAF1A6NFY7 115 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 COLCA2A8K830 154 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 PSCAO43653 123 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 APCSP02743 223 aa8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 RPS10P46783 165 aaKnown RBP8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
CLCNKA-205ENST00000477360 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 H7C423 109 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 TNFRSF6BO95407 300 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 COTL1Q14019 142 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 ST20Q9HBF5 79 aa8.26□□□□□ -1.09
CLCNKA-205ENST00000477360 C16orf90A8MZG2 172 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 SCO1O75880 301 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 NPYP01303 97 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 MIAQ16674 131 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 TMEM243Q9BU79 118 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 TRAPPC1Q9Y5R8 145 aa8.25□□□□□ -1.09
CLCNKA-205ENST00000477360 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 VCYO14598 125 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 TCAPO15273 167 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 FABP9Q0Z7S8 132 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 MPV17L2Q567V2 206 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 ALKBH7Q9BT30 221 aaPredicted RBP8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 Q9HAA7 133 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
CLCNKA-205ENST00000477360 I3L3M4 83 aa8.23□□□□□ -1.09
CLCNKA-205ENST00000477360 RAB5AP20339 215 aa8.23□□□□□ -1.09
CLCNKA-205ENST00000477360 Q8N3U1 123 aa8.23□□□□□ -1.09
CLCNKA-205ENST00000477360 K7EMI3 77 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 CRPP02741 224 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 AMTP48728 403 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 RBX1P62877 108 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 MAP1LC3AQ9H492 121 aa8.22□□□□□ -1.09
CLCNKA-205ENST00000477360 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 PMCHP20382 165 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 ENHOQ6UWT2 76 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 Q8N814 137 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 KIR2DL4Q99706 377 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.1
CLCNKA-205ENST00000477360 UBE2L6O14933 153 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 TSHBP01222 138 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 ANGP03950 147 aaKnown RBP8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 ESDP10768 282 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 ZNF25P17030 456 aaPredicted RBP8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 C14orf177Q52M58 125 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 Q8N8P6 123 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 Q8N976 141 aa8.2□□□□□ -1.1
CLCNKA-205ENST00000477360 IGKV2D-24A0A075B6R9 120 aa8.19□□□□□ -1.1
CLCNKA-205ENST00000477360 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
CLCNKA-205ENST00000477360 TRGC2P03986 189 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms