RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 IGHV4-59P01825 116 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 P0DMU3 169 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 FAM231AP0DMU4 169 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 FAM231CP0DMU5 169 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 AZU1P20160 251 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 PSMB8P28062 276 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 RHPN1-AS1Q9BWJ2 59 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 C1QTNF4Q9BXJ3 329 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 KLK15Q9H2R5 256 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 MDFICQ9P1T7 246 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 PYGO1Q9Y3Y4 419 aa5.05□□□□□ -1.6
UBR4-212ENST00000475973 TSSC4Q9Y5U2 329 aaPredicted RBP5.05□□□□□ -1.6
UBR4-212ENST00000475973 IGHV3-49A0A0A0MS15 119 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 TMEM223A0PJW6 202 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 SDHAF1A6NFY7 115 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 CFC1BP0CG36 223 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 CFC1P0CG37 223 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 TSPEAR-AS2P59090 65 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 ETDBQ3ZM63 59 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 SH2D6Q7Z4S9 175 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 C10orf126Q8N4M7 172 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 CITED1Q99966 193 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 VCX2Q9H322 139 aa5.04□□□□□ -1.6
UBR4-212ENST00000475973 DAZ1Q9NQZ3 744 aaKnown RBP5.04□□□□□ -1.6
UBR4-212ENST00000475973 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 K7EQG2 157 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 LEPROTO15243 131 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 INSL3P51460 131 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 DEFB1P60022 68 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
UBR4-212ENST00000475973 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 C20orf203Q8NBC4 194 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 LITAFQ99732 161 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 LINC00467Q9BRT7 94 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 TP53TG1Q9Y2A0 90 aa5.03□□□□□ -1.6
UBR4-212ENST00000475973 F6UB75 175 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 J3KRW8 73 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 M0R2P5 195 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 IGHV3-33P01772 117 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 S100A4P26447 101 aaKnown RBP5.02□□□□□ -1.61
UBR4-212ENST00000475973 ID1P41134 155 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 PROK1P58294 105 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 HERVK_113P61574 105 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 FHL3Q13643 280 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 Q6ZSV7 163 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 TMEM219Q86XT9 240 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 KLHL30-AS1Q8NEE0 82 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 LINC01006Q8NI28 216 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
UBR4-212ENST00000475973 C16orf95Q9H693 158 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
UBR4-212ENST00000475973 TRAV2A0A0B4J234 112 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 H3BUX3 64 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 J3QQQ9 107 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 SPRY2O43597 315 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 TCL1BO95988 128 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
UBR4-212ENST00000475973 BLCAPP62952 87 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 MRPS36P82909 103 aaKnown RBP5.01□□□□□ -1.61
UBR4-212ENST00000475973 FAM19A3Q7Z5A8 133 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 TRPT1Q86TN4 253 aaKnown RBP5.01□□□□□ -1.61
UBR4-212ENST00000475973 PPDPFLQ8WWR9 84 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 KIR2DL4Q99706 377 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 PPDPFQ9H3Y8 114 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 JPT2Q9H910 190 aa5.01□□□□□ -1.61
UBR4-212ENST00000475973 IGLV4-3A0A075B6K6 122 aa5□□□□□ -1.61
UBR4-212ENST00000475973 IGHV1OR15-1A0A075B7D0 117 aa5□□□□□ -1.61
UBR4-212ENST00000475973 TRBV30A0A0K0K1B3 111 aa5□□□□□ -1.61
UBR4-212ENST00000475973 RHODO00212 210 aa5□□□□□ -1.61
UBR4-212ENST00000475973 RPL39P62891 51 aaKnown RBP5□□□□□ -1.61
UBR4-212ENST00000475973 LY6EQ16553 131 aa5□□□□□ -1.61
UBR4-212ENST00000475973 FAM159AQ6UWV7 190 aa5□□□□□ -1.61
UBR4-212ENST00000475973 C1orf43Q9BWL3 253 aa5□□□□□ -1.61
UBR4-212ENST00000475973 SPANXDQ9BXN6 97 aa5□□□□□ -1.61
UBR4-212ENST00000475973 GTSF1LQ9H1H1 148 aa5□□□□□ -1.61
UBR4-212ENST00000475973 SPANXCQ9NY87 97 aa5□□□□□ -1.61
UBR4-212ENST00000475973 PRO1854Q9UHT4 67 aa5□□□□□ -1.61
UBR4-212ENST00000475973 LINC00527Q9UJ94 153 aa5□□□□□ -1.61
UBR4-212ENST00000475973 MEGF8Q7Z7M0 2845 aa5□□□□□ -1.61
UBR4-212ENST00000475973 IGLV5-45A0A087WSX0 123 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 TIMM17BO60830 172 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 APOMO95445 188 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 MGPP08493 103 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 EDN2P20800 178 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
UBR4-212ENST00000475973 DEFB121Q5J5C9 76 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 Q8N3U1 123 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 MRPL16Q9NX20 251 aaKnown RBP4.99□□□□□ -1.61
UBR4-212ENST00000475973 TENM1Q9UKZ4 2725 aa4.99□□□□□ -1.61
UBR4-212ENST00000475973 A0A0J9YXY3 114 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 I3L3M4 83 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 SMAGPQ0VAQ4 97 aa4.98□□□□□ -1.61
UBR4-212ENST00000475973 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms