RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 LINC00299Q6ZSB3 139 aa10.9□□□□□ -0.66
RNF220-212ENST00000475378 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
RNF220-212ENST00000475378 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
RNF220-212ENST00000475378 MAP1LC3B2A6NCE7 125 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 PTTG1IPP53801 180 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 CACNG7P62955 275 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 COTL1Q14019 142 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 STOML3Q8TAV4 291 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 S100ZQ8WXG8 99 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 MAP1LC3BQ9GZQ8 125 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 NIT2Q9NQR4 276 aa10.89□□□□□ -0.67
RNF220-212ENST00000475378 A0A1W2PNN7 141 aa10.88□□□□□ -0.67
RNF220-212ENST00000475378 S100A9P06702 114 aaKnown RBP10.87□□□□□ -0.67
RNF220-212ENST00000475378 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
RNF220-212ENST00000475378 BAGE2Q86Y30 109 aa10.87□□□□□ -0.67
RNF220-212ENST00000475378 AKR1C8PQ5T2L2 129 aa10.86□□□□□ -0.67
RNF220-212ENST00000475378 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
RNF220-212ENST00000475378 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
RNF220-212ENST00000475378 PAGE4O60829 102 aa10.85□□□□□ -0.67
RNF220-212ENST00000475378 MT-ND6P03923 174 aa10.85□□□□□ -0.67
RNF220-212ENST00000475378 Q5BKY6 102 aa10.85□□□□□ -0.67
RNF220-212ENST00000475378 BORCS7-ASMTA0A0B4J1R7 106 aa10.84□□□□□ -0.67
RNF220-212ENST00000475378 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
RNF220-212ENST00000475378 PRR4Q16378 134 aa10.84□□□□□ -0.67
RNF220-212ENST00000475378 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
RNF220-212ENST00000475378 FER1L6-AS1Q8NA97 138 aa10.84□□□□□ -0.67
RNF220-212ENST00000475378 NTF3P20783 257 aa10.83□□□□□ -0.68
RNF220-212ENST00000475378 XCL1P47992 114 aa10.83□□□□□ -0.68
RNF220-212ENST00000475378 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
RNF220-212ENST00000475378 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.68
RNF220-212ENST00000475378 NDUFA13Q9P0J0 144 aa10.83□□□□□ -0.68
RNF220-212ENST00000475378 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
RNF220-212ENST00000475378 Q6ZNX1 250 aa10.82□□□□□ -0.68
RNF220-212ENST00000475378 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
RNF220-212ENST00000475378 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
RNF220-212ENST00000475378 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
RNF220-212ENST00000475378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
RNF220-212ENST00000475378 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
RNF220-212ENST00000475378 H7C423 109 aa10.81□□□□□ -0.68
RNF220-212ENST00000475378 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
RNF220-212ENST00000475378 RNASEKQ6P5S7 137 aaKnown RBP10.81□□□□□ -0.68
RNF220-212ENST00000475378 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
RNF220-212ENST00000475378 CCL25O15444 150 aa10.8□□□□□ -0.68
RNF220-212ENST00000475378 IGLV7-43P04211 117 aa10.8□□□□□ -0.68
RNF220-212ENST00000475378 FGF6P10767 208 aa10.8□□□□□ -0.68
RNF220-212ENST00000475378 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
RNF220-212ENST00000475378 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 H0Y9J4 135 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 KRTAP1-4P0C5Y4 121 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 ALG5Q9Y673 324 aa10.79□□□□□ -0.68
RNF220-212ENST00000475378 NCR2O95944 276 aa10.78□□□□□ -0.68
RNF220-212ENST00000475378 BCL2P10415 239 aa10.78□□□□□ -0.68
RNF220-212ENST00000475378 CAMPP49913 170 aa10.78□□□□□ -0.68
RNF220-212ENST00000475378 TMUB2Q71RG4 321 aa10.78□□□□□ -0.68
RNF220-212ENST00000475378 ZNF25P17030 456 aaPredicted RBP10.77□□□□□ -0.69
RNF220-212ENST00000475378 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
RNF220-212ENST00000475378 GATD1Q8NB37 220 aa10.77□□□□□ -0.69
RNF220-212ENST00000475378 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
RNF220-212ENST00000475378 OR2D3Q8NGH3 330 aa10.77□□□□□ -0.69
RNF220-212ENST00000475378 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
RNF220-212ENST00000475378 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
RNF220-212ENST00000475378 F2Z2F3 143 aa10.76□□□□□ -0.69
RNF220-212ENST00000475378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
RNF220-212ENST00000475378 RPL35P42766 123 aaKnown RBP10.76□□□□□ -0.69
RNF220-212ENST00000475378 MEF2BQ02080 365 aaPredicted RBP10.76□□□□□ -0.69
RNF220-212ENST00000475378 ISOC2Q96AB3 205 aa10.76□□□□□ -0.69
RNF220-212ENST00000475378 APCSP02743 223 aa10.75□□□□□ -0.69
RNF220-212ENST00000475378 CD164L2Q6UWJ8 174 aa10.75□□□□□ -0.69
RNF220-212ENST00000475378 LYZL1Q6UWQ5 148 aa10.75□□□□□ -0.69
RNF220-212ENST00000475378 CYTL1Q9NRR1 136 aa10.75□□□□□ -0.69
RNF220-212ENST00000475378 PFDN1O60925 122 aa10.74□□□□□ -0.69
RNF220-212ENST00000475378 APOMO95445 188 aa10.74□□□□□ -0.69
RNF220-212ENST00000475378 DEFA1P59665 94 aa10.74□□□□□ -0.69
RNF220-212ENST00000475378 KRTAP11-1Q8IUC1 163 aa10.74□□□□□ -0.69
RNF220-212ENST00000475378 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
RNF220-212ENST00000475378 FXYD6-FXYD2A0A087WZ82 144 aa10.73□□□□□ -0.69
RNF220-212ENST00000475378 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
RNF220-212ENST00000475378 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
RNF220-212ENST00000475378 SS18Q15532 418 aa10.72□□□□□ -0.69
RNF220-212ENST00000475378 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
RNF220-212ENST00000475378 A0A1B0GV50 99 aa10.71□□□□□ -0.69
RNF220-212ENST00000475378 RPL18AQ02543 176 aaKnown RBP10.71□□□□□ -0.69
RNF220-212ENST00000475378 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
RNF220-212ENST00000475378 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
RNF220-212ENST00000475378 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
RNF220-212ENST00000475378 MUC17Q685J3 4493 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 ESDP10768 282 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 CTRLP40313 264 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 CENPWQ5EE01 88 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 C11orf52Q96A22 123 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
RNF220-212ENST00000475378 A0A087WZ39 114 aa10.69□□□□□ -0.7
RNF220-212ENST00000475378 TRAV1-1A0A0B4J248 108 aa10.69□□□□□ -0.7
RNF220-212ENST00000475378 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
RNF220-212ENST00000475378 IFNA1P01562 189 aa10.69□□□□□ -0.7
RNF220-212ENST00000475378 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms