RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FER1L6-AS1Q8NA97 138 aa12.78□□□□□ -0.36
VPS36-203ENST00000475375 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
VPS36-203ENST00000475375 PGLYRP4Q96LB8 373 aa12.78□□□□□ -0.36
VPS36-203ENST00000475375 A0A096LNI7 61 aa12.76□□□□□ -0.37
VPS36-203ENST00000475375 NIT2Q9NQR4 276 aa12.76□□□□□ -0.37
VPS36-203ENST00000475375 CACNG7P62955 275 aa12.75□□□□□ -0.37
VPS36-203ENST00000475375 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
VPS36-203ENST00000475375 FAM213BQ8TBF2 198 aa12.75□□□□□ -0.37
VPS36-203ENST00000475375 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
VPS36-203ENST00000475375 OR2D3Q8NGH3 330 aa12.74□□□□□ -0.37
VPS36-203ENST00000475375 CYTL1Q9NRR1 136 aa12.74□□□□□ -0.37
VPS36-203ENST00000475375 LINC00474Q9P2X8 69 aa12.74□□□□□ -0.37
VPS36-203ENST00000475375 ARPC5O15511 151 aa12.73□□□□□ -0.37
VPS36-203ENST00000475375 IGLC6P0CF74 106 aa12.73□□□□□ -0.37
VPS36-203ENST00000475375 RPL35P42766 123 aaKnown RBP12.73□□□□□ -0.37
VPS36-203ENST00000475375 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
VPS36-203ENST00000475375 AMMECR1LQ6DCA0 310 aa12.73□□□□□ -0.37
VPS36-203ENST00000475375 GVQW2A0A096LPI5 108 aaPredicted RBP12.72□□□□□ -0.37
VPS36-203ENST00000475375 TRGC1P0CF51 173 aa12.72□□□□□ -0.37
VPS36-203ENST00000475375 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
VPS36-203ENST00000475375 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.37
VPS36-203ENST00000475375 Q6ZRP5 223 aa12.71□□□□□ -0.37
VPS36-203ENST00000475375 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.37
VPS36-203ENST00000475375 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.37
VPS36-203ENST00000475375 XKRY2A2RUG3 117 aa12.68□□□□□ -0.38
VPS36-203ENST00000475375 F2Z2F3 143 aa12.68□□□□□ -0.38
VPS36-203ENST00000475375 SRSF9Q13242 221 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS36-203ENST00000475375 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
VPS36-203ENST00000475375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.67□□□□□ -0.38
VPS36-203ENST00000475375 IGKV2-29A2NJV5 120 aaPredicted RBP12.67□□□□□ -0.38
VPS36-203ENST00000475375 UMAD1C9J7I0 102 aa12.67□□□□□ -0.38
VPS36-203ENST00000475375 NTF3P20783 257 aa12.67□□□□□ -0.38
VPS36-203ENST00000475375 LYZL1Q6UWQ5 148 aa12.67□□□□□ -0.38
VPS36-203ENST00000475375 LINC00526Q96FQ7 95 aa12.67□□□□□ -0.38
VPS36-203ENST00000475375 IFNA1P01562 189 aa12.66□□□□□ -0.38
VPS36-203ENST00000475375 XCL1P47992 114 aa12.66□□□□□ -0.38
VPS36-203ENST00000475375 FOXI1Q12951 378 aa12.66□□□□□ -0.38
VPS36-203ENST00000475375 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
VPS36-203ENST00000475375 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
VPS36-203ENST00000475375 Q6ZNX1 250 aa12.65□□□□□ -0.38
VPS36-203ENST00000475375 LPAP08519 4548 aa12.64□□□□□ -0.39
VPS36-203ENST00000475375 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
VPS36-203ENST00000475375 G3V3Q6 166 aa12.64□□□□□ -0.39
VPS36-203ENST00000475375 C19orf71A6NCJ1 209 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 APCSP02743 223 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 FGF6P10767 208 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 TWIST1Q15672 202 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 GATD1Q8NB37 220 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 C11orf52Q96A22 123 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 GNG13Q9P2W3 67 aa12.63□□□□□ -0.39
VPS36-203ENST00000475375 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
VPS36-203ENST00000475375 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
VPS36-203ENST00000475375 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
VPS36-203ENST00000475375 GNG4P50150 75 aa12.62□□□□□ -0.39
VPS36-203ENST00000475375 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
VPS36-203ENST00000475375 H7C423 109 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 CCL25O15444 150 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 NCR2O95944 276 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 TMEM101Q96IK0 257 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
VPS36-203ENST00000475375 ZNF561-AS1K7EIQ3 104 aa12.6□□□□□ -0.39
VPS36-203ENST00000475375 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
VPS36-203ENST00000475375 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
VPS36-203ENST00000475375 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
VPS36-203ENST00000475375 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
VPS36-203ENST00000475375 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
VPS36-203ENST00000475375 C9orf62Q8N4C0 152 aa12.59□□□□□ -0.39
VPS36-203ENST00000475375 LINC00959A0A1B0GUT2 108 aa12.58□□□□□ -0.4
VPS36-203ENST00000475375 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
VPS36-203ENST00000475375 CTRLP40313 264 aa12.58□□□□□ -0.4
VPS36-203ENST00000475375 CCL20P78556 96 aa12.58□□□□□ -0.4
VPS36-203ENST00000475375 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
VPS36-203ENST00000475375 MT-ND6P03923 174 aa12.57□□□□□ -0.4
VPS36-203ENST00000475375 BIN3Q9NQY0 253 aa12.57□□□□□ -0.4
VPS36-203ENST00000475375 LOC107984640A0A0U1RRK4 108 aa12.56□□□□□ -0.4
VPS36-203ENST00000475375 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
VPS36-203ENST00000475375 SS18Q15532 418 aa12.56□□□□□ -0.4
VPS36-203ENST00000475375 SMIM15Q7Z3B0 74 aa12.56□□□□□ -0.4
VPS36-203ENST00000475375 PMCHP20382 165 aa12.55□□□□□ -0.4
VPS36-203ENST00000475375 CAMPP49913 170 aa12.55□□□□□ -0.4
VPS36-203ENST00000475375 ZNF345Q14585 488 aa12.55□□□□□ -0.4
VPS36-203ENST00000475375 ZNF664Q8N3J9 261 aa12.55□□□□□ -0.4
VPS36-203ENST00000475375 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 NUDT11Q96G61 164 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 PSORS1C2Q9UIG4 136 aa12.54□□□□□ -0.4
VPS36-203ENST00000475375 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
VPS36-203ENST00000475375 CNFNQ9BYD5 112 aa12.53□□□□□ -0.4
VPS36-203ENST00000475375 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 IGLV4-69A0A075B6H9 119 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 I3L3M4 83 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 BCL2L11O43521 198 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 BCL2P10415 239 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 MALP21145 153 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
VPS36-203ENST00000475375 C1orf137Q5JT78 98 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms