RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 DYNAPQ8N1N2 210 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 LY6G5BQ8NDX9 201 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 UBE2E2Q96LR5 201 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 C17orf77Q96MU5 243 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 TMEM14CQ9P0S9 112 aa5.4□□□□□ -1.54
GPNMB-209ENST00000474157 SHANK1Q9Y566 2161 aa5.4□□□□□ -1.55
GPNMB-209ENST00000474157 TACC2O95359 2948 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 POLEQ07864 2286 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 C17orf98A8MV24 154 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 ERC2-IT1O76042 136 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 RBM3P98179 157 aaKnown RBP5.39□□□□□ -1.55
GPNMB-209ENST00000474157 PVRIGQ6DKI7 326 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 GFRALQ6UXV0 394 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 ITLN2Q8WWU7 325 aaPredicted RBP5.39□□□□□ -1.55
GPNMB-209ENST00000474157 RPL36ALQ969Q0 106 aaKnown RBP5.39□□□□□ -1.55
GPNMB-209ENST00000474157 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 JMJD1CQ15652 2540 aa5.39□□□□□ -1.55
GPNMB-209ENST00000474157 ARID1AO14497 2285 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 IGLV3-32A0A0A0MS00 114 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 IGHV3-13P01766 116 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 STATHP02808 62 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 LYZL1Q6UWQ5 148 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
GPNMB-209ENST00000474157 WDR86Q86TI4 376 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 THAP8Q8NA92 274 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 FDCSPQ8NFU4 85 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 FGFBP3Q8TAT2 258 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
GPNMB-209ENST00000474157 PRRC2CQ9Y520 2896 aaKnown RBP5.38□□□□□ -1.55
GPNMB-209ENST00000474157 IGHV1OR21-1A0A087WYE8 117 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 LEPROTO15243 131 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 FREM3P0C091 2139 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 APOC4P55056 127 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 Q1T7F1 81 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 DEFB110Q30KQ9 67 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 ODF3L2Q3SX64 289 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 C17orf82Q86X59 251 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-209ENST00000474157 Q8N2B8 174 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 TMEM141Q96I45 108 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 CXXC4Q9H2H0 198 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 Q9H3A6 140 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 TMEM14BQ9NUH8 114 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 SEC16AO15027 2179 aa5.37□□□□□ -1.55
GPNMB-209ENST00000474157 COL6A5A8TX70 2615 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 IGLV5-39A0A0G2JS06 123 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 TMEM30CPA0ZSE6 113 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 HIST2H2BDQ6DRA6 164 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 LYPD5Q6UWN5 251 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 RNASE6Q93091 150 aaKnown RBP5.36□□□□□ -1.55
GPNMB-209ENST00000474157 AGRNO00468 2067 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 PKDREJQ9NTG1 2253 aa5.36□□□□□ -1.55
GPNMB-209ENST00000474157 ATRQ13535 2644 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 DIDO1Q9BTC0 2240 aaKnown RBP5.35□□□□□ -1.55
GPNMB-209ENST00000474157 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 M0R3E3 92 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 COX7A2LO14548 114 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 FSTL3O95633 263 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 DNAL4O96015 105 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 IGLV2-11P01706 119 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 PRSS2P07478 247 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 ZNF80P51504 273 aaPredicted RBP5.35□□□□□ -1.55
GPNMB-209ENST00000474157 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 UBE2BP63146 152 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 PRCDQ00LT1 54 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 PDE6HQ13956 83 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 NSUN5P1Q3KNT7 163 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 IGFL3Q6UXB1 125 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 C16orf47Q6ZP98 133 aaPredicted RBP5.35□□□□□ -1.55
GPNMB-209ENST00000474157 MUSTN1Q8IVN3 82 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 NRACQ8N912 160 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 FLVCR1-AS1Q8TAF5 88 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 IMMP1LQ96LU5 166 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 ACANP16112 2415 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 TANC2Q9HCD6 1990 aa5.35□□□□□ -1.55
GPNMB-209ENST00000474157 DCHS2Q6V1P9 2916 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 IGHV3OR16-10A0A075B7F0 116 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 IGHV1-45A0A0A0MS14 117 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 IGHV5-51A0A0C4DH38 117 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 DNAJC9-AS1A6NH13 148 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 CCL21O00585 134 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 SH2D1AO60880 128 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 BLCAPP62952 87 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 ERHP84090 104 aaKnown RBP5.34□□□□□ -1.55
GPNMB-209ENST00000474157 ESRGQ1W209 222 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 Q6ZSV7 163 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 VMO1Q7Z5L0 202 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 PRNTQ86SH4 94 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 ZNF491Q8N8L2 437 aa5.34□□□□□ -1.55
GPNMB-209ENST00000474157 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.56
GPNMB-209ENST00000474157 MPDZO75970 2070 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 IGHV4-4A0A075B6R2 117 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 H0YGG7 62 aa5.33□□□□□ -1.56
GPNMB-209ENST00000474157 C19orf84I3L1E1 186 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms