RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PMCHL1Q16048 86 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 MAJINQ3KP22 176 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TDRG1Q3Y452 100 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 LCN12Q6JVE5 192 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 FAM159AQ6UWV7 190 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ATP5L2Q7Z4Y8 100 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 AMN1Q8IY45 258 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 Q8N2B8 174 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 FAM19A2Q8N3H0 131 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ZFAND2AQ8N6M9 145 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 ARL6IP6Q8N6S5 226 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 OR4B1Q8NGF8 309 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 OR4X2Q8NGF9 303 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 OR2D3Q8NGH3 330 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 OR10AG1Q8NH19 301 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 CMTM2Q8TAZ6 248 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 DCANP1Q8TF63 244 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TSKUQ8WUA8 353 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 RNF185Q96GF1 192 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 KCNS1Q96KK3 526 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PGLYRP4Q96LB8 373 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 FAM19A4Q96LR4 140 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 METTL26Q96S19 204 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 KIR2DL4Q99706 377 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 SLC50A1Q9BRV3 221 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 TPPP3Q9BW30 176 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 RHPN1-AS1Q9BWJ2 59 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 GNB1LQ9BYB4 327 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 CNFNQ9BYD5 112 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 AGPAT4-IT1Q9H0P7 198 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PRO1933Q9H354 126 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 NIT2Q9NQR4 276 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 NAT8BQ9UHF3 227 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PITPNC1Q9UKF7 332 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 PRELID1Q9Y255 219 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
CCDC39-203ENST00000473854 LOC102724200A0A096LPH7 203 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV26-2A0A0B4J265 109 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 A0A0J9YX75 114 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 A0A1B0GUT8 65 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM189A5PLL7 270 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RBAKDNA6NC62 111 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 LRCOL1A6NCL2 159 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FBLL1A6NHQ2 334 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 C2orf70A6NJV1 201 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 KNCNA6PVL3 124 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 A8MTW9 85 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 A8MWL6 223 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 D6R8Y8 96 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 M0R2Z0 102 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CRXO43186 299 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 SNAI2O43623 268 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CD5LO43866 347 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF324O75467 553 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 APCSP02743 223 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 S100A9P06702 114 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 GPX1P07203 203 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF688P0C7X2 276 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 C3orf79P0CE67 100 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CD28P10747 220 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RNASE3P12724 160 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CRISP2P16562 243 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 EVI2AP22794 236 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 S100A2P29034 98 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TFPI2P48307 235 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RIPPLY3P57055 190 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 SYNJ2BPP57105 145 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FXYD7P58549 80 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CTAG1AP78358 180 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 S100A12P80511 92 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 HIST1H1AQ02539 215 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 MRPL51Q4U2R6 128 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 OR10J3Q5JRS4 329 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 DNLZQ5SXM8 178 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 C1orf194Q5T5A4 169 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FAM162BQ5T6X4 162 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 KPRPQ5T749 579 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FAM104BQ5XKR9 115 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 Q6AWC8 147 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 CYB5R2Q6BCY4 276 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 EBLN2Q6P2I7 272 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RNASEKQ6P5S7 137 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 MORN3Q6PF18 240 aaPredicted RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RASL11AQ6T310 242 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 LYZL1Q6UWQ5 148 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 AMTNQ6UX39 209 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TEX43Q6ZNM6 134 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF493Q6ZR52 646 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 NEGR1Q7Z3B1 354 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 BAGE3Q86Y29 109 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM61Q8N0U2 210 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ATOH7Q8N100 152 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF664Q8N3J9 261 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 TMEM86BQ8N661 226 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 FER1L6-AS1Q8NA97 138 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 ZNF738Q8NE65 137 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 OR8A1Q8NGG7 326 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
CCDC39-203ENST00000473854 RPL39LQ96EH5 51 aaKnown RBP0.92□□□□□ -2.26
CCDC39-203ENST00000473854 C14orf144Q96I85 54 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms