RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
EPHB3-202ENST00000473079 C20orf203Q8NBC4 194 aa13.49□□□□□ -0.25
EPHB3-202ENST00000473079 COTL1Q14019 142 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 CT83Q5H943 113 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 CLPSL2Q6UWE3 100 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 TEX261Q6UWH6 196 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 SMIM15Q7Z3B0 74 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
EPHB3-202ENST00000473079 IGLV4-60A0A075B6I1 120 aa13.47□□□□□ -0.25
EPHB3-202ENST00000473079 PRSS1P07477 247 aa13.47□□□□□ -0.25
EPHB3-202ENST00000473079 AMTP48728 403 aa13.46□□□□□ -0.25
EPHB3-202ENST00000473079 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
EPHB3-202ENST00000473079 EIF5A2Q9GZV4 153 aaKnown RBP13.46□□□□□ -0.25
EPHB3-202ENST00000473079 MYCBP2O75592 4640 aa13.46□□□□□ -0.25
EPHB3-202ENST00000473079 TRAV26-2A0A0B4J265 109 aa13.45□□□□□ -0.26
EPHB3-202ENST00000473079 UBE2L6O14933 153 aa13.45□□□□□ -0.26
EPHB3-202ENST00000473079 CIRBP-AS1Q8TBR5 109 aa13.45□□□□□ -0.26
EPHB3-202ENST00000473079 FAM210AQ96ND0 272 aa13.45□□□□□ -0.26
EPHB3-202ENST00000473079 HERC1Q15751 4861 aa13.44□□□□□ -0.26
EPHB3-202ENST00000473079 CEBPGP53567 150 aa13.44□□□□□ -0.26
EPHB3-202ENST00000473079 C9orf163Q8N9P6 203 aa13.44□□□□□ -0.26
EPHB3-202ENST00000473079 SMIM7Q9BQ49 75 aa13.44□□□□□ -0.26
EPHB3-202ENST00000473079 GFRA4Q9GZZ7 299 aa13.44□□□□□ -0.26
EPHB3-202ENST00000473079 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
EPHB3-202ENST00000473079 NCR2O95944 276 aa13.43□□□□□ -0.26
EPHB3-202ENST00000473079 LINC01551Q86U37 167 aa13.43□□□□□ -0.26
EPHB3-202ENST00000473079 DEFB104AQ8WTQ1 72 aa13.43□□□□□ -0.26
EPHB3-202ENST00000473079 FAM231BA6NCW3 169 aa13.42□□□□□ -0.26
EPHB3-202ENST00000473079 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
EPHB3-202ENST00000473079 DMBT1Q9UGM3 2413 aaPredicted RBP13.41□□□□□ -0.26
EPHB3-202ENST00000473079 H7C423 109 aa13.41□□□□□ -0.26
EPHB3-202ENST00000473079 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
EPHB3-202ENST00000473079 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
EPHB3-202ENST00000473079 OSTCQ9NRP0 149 aa13.41□□□□□ -0.26
EPHB3-202ENST00000473079 TRBV6-5A0A0K0K1A5 114 aa13.4□□□□□ -0.26
EPHB3-202ENST00000473079 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
EPHB3-202ENST00000473079 BORCS7Q96B45 105 aa13.4□□□□□ -0.26
EPHB3-202ENST00000473079 SDHAF1A6NFY7 115 aa13.39□□□□□ -0.27
EPHB3-202ENST00000473079 CNBPP62633 177 aaKnown RBP13.39□□□□□ -0.27
EPHB3-202ENST00000473079 FLG2Q5D862 2391 aaPredicted RBP13.39□□□□□ -0.27
EPHB3-202ENST00000473079 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
EPHB3-202ENST00000473079 HIGD1CA8MV81 97 aa13.38□□□□□ -0.27
EPHB3-202ENST00000473079 TMEM191AQ9H0A3 160 aa13.38□□□□□ -0.27
EPHB3-202ENST00000473079 A0A1B0GVG6 124 aa13.37□□□□□ -0.27
EPHB3-202ENST00000473079 KRTAP10-4P60372 401 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-202ENST00000473079 SDIM1Q6ZPB5 146 aa13.37□□□□□ -0.27
EPHB3-202ENST00000473079 I3L3M4 83 aa13.36□□□□□ -0.27
EPHB3-202ENST00000473079 APCSP02743 223 aa13.36□□□□□ -0.27
EPHB3-202ENST00000473079 hDV102S1A0JD36 115 aa13.35□□□□□ -0.27
EPHB3-202ENST00000473079 FAM74A3Q4VXF1 159 aa13.35□□□□□ -0.27
EPHB3-202ENST00000473079 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
EPHB3-202ENST00000473079 FGF6P10767 208 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 PMCHP20382 165 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 ST20Q9HBF5 79 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 AP5S1Q9NUS5 200 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 V9GYV3 84 aa13.34□□□□□ -0.27
EPHB3-202ENST00000473079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.33□□□□□ -0.28
EPHB3-202ENST00000473079 IGKV2-29A2NJV5 120 aaPredicted RBP13.33□□□□□ -0.28
EPHB3-202ENST00000473079 ZNF25P17030 456 aaPredicted RBP13.33□□□□□ -0.28
EPHB3-202ENST00000473079 RAB4AP20338 218 aa13.33□□□□□ -0.28
EPHB3-202ENST00000473079 ISOC2Q96AB3 205 aa13.33□□□□□ -0.28
EPHB3-202ENST00000473079 MRAP2Q96G30 205 aa13.33□□□□□ -0.28
EPHB3-202ENST00000473079 RNF185Q96GF1 192 aa13.33□□□□□ -0.28
EPHB3-202ENST00000473079 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
EPHB3-202ENST00000473079 GAGE12HA6NDE8 117 aa13.32□□□□□ -0.28
EPHB3-202ENST00000473079 KRTAP29-1A8MX34 341 aaPredicted RBP13.32□□□□□ -0.28
EPHB3-202ENST00000473079 GAS8-AS1O95177 125 aa13.32□□□□□ -0.28
EPHB3-202ENST00000473079 SLPIP03973 132 aa13.32□□□□□ -0.28
EPHB3-202ENST00000473079 ESDP10768 282 aa13.32□□□□□ -0.28
EPHB3-202ENST00000473079 POLR2KP53803 58 aaKnown RBP13.32□□□□□ -0.28
EPHB3-202ENST00000473079 RNASEKQ6P5S7 137 aaKnown RBP13.32□□□□□ -0.28
EPHB3-202ENST00000473079 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
EPHB3-202ENST00000473079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.32□□□□□ -0.28
EPHB3-202ENST00000473079 TRBV27A0A0K0K1C4 114 aa13.31□□□□□ -0.28
EPHB3-202ENST00000473079 TSHBP01222 138 aa13.31□□□□□ -0.28
EPHB3-202ENST00000473079 RIGQ13278 110 aa13.31□□□□□ -0.28
EPHB3-202ENST00000473079 CIRBPQ14011 172 aaKnown RBP13.31□□□□□ -0.28
EPHB3-202ENST00000473079 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
EPHB3-202ENST00000473079 J3QL48 77 aa13.3□□□□□ -0.28
EPHB3-202ENST00000473079 RPL23P62829 140 aaKnown RBP13.3□□□□□ -0.28
EPHB3-202ENST00000473079 C15orf56Q8N910 161 aa13.3□□□□□ -0.28
EPHB3-202ENST00000473079 IGHV3-64A0A075B6Q5 118 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 PANO1I0J062 215 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 AMN1Q8IY45 258 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 CHCHD10Q8WYQ3 142 aaPredicted RBP13.29□□□□□ -0.28
EPHB3-202ENST00000473079 BTF3L4Q96K17 158 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 SMDT1Q9H4I9 107 aa13.29□□□□□ -0.28
EPHB3-202ENST00000473079 IGKV3OR2-268A0A0C4DH90 116 aa13.28□□□□□ -0.28
EPHB3-202ENST00000473079 C9JQL5 133 aa13.28□□□□□ -0.28
EPHB3-202ENST00000473079 RPS10P46783 165 aaKnown RBP13.28□□□□□ -0.28
EPHB3-202ENST00000473079 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
EPHB3-202ENST00000473079 NAT8Q9UHE5 227 aa13.28□□□□□ -0.28
EPHB3-202ENST00000473079 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
EPHB3-202ENST00000473079 PPP1R17O96001 155 aa13.27□□□□□ -0.29
EPHB3-202ENST00000473079 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
EPHB3-202ENST00000473079 TMEM242Q9NWH2 141 aa13.27□□□□□ -0.29
EPHB3-202ENST00000473079 PEA15Q15121 130 aa13.26□□□□□ -0.29
EPHB3-202ENST00000473079 SMIM27A0A1W2PRY6 76 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms