RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 ZNF815PA8K554 130 aa13.48□□□□□ -0.25
COL20A1-205ENST00000471582 K7EP13 123 aa13.48□□□□□ -0.25
COL20A1-205ENST00000471582 CRYBA4P53673 196 aa13.48□□□□□ -0.25
COL20A1-205ENST00000471582 MRPL16Q9NX20 251 aaKnown RBP13.48□□□□□ -0.25
COL20A1-205ENST00000471582 IGLV4-3A0A075B6K6 122 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 SAP30O75446 220 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 EMP1P54849 157 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 Q6ZSN1 163 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 GTF2H5Q6ZYL4 71 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 RAB37Q96AX2 223 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 GAGE10A6NGK3 116 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 ADARB2-AS1A8MUL3 147 aa13.47□□□□□ -0.25
COL20A1-205ENST00000471582 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-205ENST00000471582 A0A1W2PPM0 123 aa13.46□□□□□ -0.25
COL20A1-205ENST00000471582 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.25
COL20A1-205ENST00000471582 NHP2Q9NX24 153 aaKnown RBP13.46□□□□□ -0.25
COL20A1-205ENST00000471582 WNK1Q9H4A3 2382 aa13.46□□□□□ -0.25
COL20A1-205ENST00000471582 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.26
COL20A1-205ENST00000471582 AZU1P20160 251 aa13.45□□□□□ -0.26
COL20A1-205ENST00000471582 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
COL20A1-205ENST00000471582 OPRPNQ99935 248 aaPredicted RBP13.45□□□□□ -0.26
COL20A1-205ENST00000471582 VCX2Q9H322 139 aa13.45□□□□□ -0.26
COL20A1-205ENST00000471582 K7EP34 96 aa13.45□□□□□ -0.26
COL20A1-205ENST00000471582 NDUFA11Q86Y39 141 aa13.44□□□□□ -0.26
COL20A1-205ENST00000471582 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
COL20A1-205ENST00000471582 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
COL20A1-205ENST00000471582 AMELXQ99217 191 aa13.43□□□□□ -0.26
COL20A1-205ENST00000471582 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
COL20A1-205ENST00000471582 SAMD5Q5TGI4 173 aa13.43□□□□□ -0.26
COL20A1-205ENST00000471582 SPANXA1Q9NS26 97 aa13.43□□□□□ -0.26
COL20A1-205ENST00000471582 NIPBLQ6KC79 2804 aaeCLIP13.43□□□□□ -0.26
COL20A1-205ENST00000471582 TEP1Q99973 2627 aaKnown RBP13.42□□□□□ -0.26
COL20A1-205ENST00000471582 K7ERJ3 54 aa13.42□□□□□ -0.26
COL20A1-205ENST00000471582 FABP2P12104 132 aa13.42□□□□□ -0.26
COL20A1-205ENST00000471582 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
COL20A1-205ENST00000471582 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 TMEM223A0PJW6 202 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 NAA38Q9BRA0 125 aaKnown RBP13.41□□□□□ -0.26
COL20A1-205ENST00000471582 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 Q9UF83 564 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
COL20A1-205ENST00000471582 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 FAM104AQ969W3 186 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
COL20A1-205ENST00000471582 J3QQQ9 107 aa13.4□□□□□ -0.26
COL20A1-205ENST00000471582 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
COL20A1-205ENST00000471582 COTL1Q14019 142 aa13.4□□□□□ -0.26
COL20A1-205ENST00000471582 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 GAGE12BA1L429 117 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 LEPROTO15243 131 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 GIG44P09565 113 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-205ENST00000471582 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 C2CD3Q4AC94 2353 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 A0A0J9YY99 117 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 A6NJY4 79 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 MRPS36P82909 103 aaKnown RBP13.39□□□□□ -0.27
COL20A1-205ENST00000471582 C1QTNF4Q9BXJ3 329 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-205ENST00000471582 UBE2D4Q9Y2X8 147 aa13.39□□□□□ -0.27
COL20A1-205ENST00000471582 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
COL20A1-205ENST00000471582 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
COL20A1-205ENST00000471582 PF4P02776 101 aa13.38□□□□□ -0.27
COL20A1-205ENST00000471582 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
COL20A1-205ENST00000471582 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
COL20A1-205ENST00000471582 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
COL20A1-205ENST00000471582 KRTAP10-3P60369 221 aa13.37□□□□□ -0.27
COL20A1-205ENST00000471582 IGLL5B9A064 214 aa13.37□□□□□ -0.27
COL20A1-205ENST00000471582 SRSF9Q13242 221 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL20A1-205ENST00000471582 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
COL20A1-205ENST00000471582 Q6ZTI0 123 aa13.35□□□□□ -0.27
COL20A1-205ENST00000471582 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
COL20A1-205ENST00000471582 TIMM21Q9BVV7 248 aa13.35□□□□□ -0.27
COL20A1-205ENST00000471582 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
COL20A1-205ENST00000471582 WFDC10AQ9H1F0 79 aa13.35□□□□□ -0.27
COL20A1-205ENST00000471582 JMJD1CQ15652 2540 aa13.34□□□□□ -0.27
COL20A1-205ENST00000471582 K7EQD1 137 aa13.34□□□□□ -0.27
COL20A1-205ENST00000471582 CEMP1Q6PRD7 247 aaPredicted RBP13.34□□□□□ -0.27
COL20A1-205ENST00000471582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-205ENST00000471582 TINCRA0A1B0GVN0 87 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 IGKV2-29A2NJV5 120 aaPredicted RBP13.33□□□□□ -0.28
COL20A1-205ENST00000471582 UBE2D1P51668 147 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
COL20A1-205ENST00000471582 CSNK1G2-AS1Q8NCQ2 148 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
COL20A1-205ENST00000471582 IGHV3-38A0A0C4DH36 116 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 CIDEAO60543 219 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 RRN3P1Q2M238 152 aa13.33□□□□□ -0.28
COL20A1-205ENST00000471582 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
COL20A1-205ENST00000471582 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
COL20A1-205ENST00000471582 NOP10Q9NPE3 64 aaKnown RBP13.32□□□□□ -0.28
COL20A1-205ENST00000471582 DAZ4Q86SG3 579 aaKnown RBP13.31□□□□□ -0.28
COL20A1-205ENST00000471582 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
COL20A1-205ENST00000471582 DAZ3Q9NR90 486 aaKnown RBP13.31□□□□□ -0.28
COL20A1-205ENST00000471582 IGHV3-30P01768 117 aa13.31□□□□□ -0.28
COL20A1-205ENST00000471582 IGHV3-30-5P0DP03 117 aa13.31□□□□□ -0.28
COL20A1-205ENST00000471582 Q6ZUT4 128 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms