RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 NBDYA0A0U1RRE5 68 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 M0R2N4 97 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 VCYO14598 125 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 TSHBP01222 138 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 LINC01556Q5JQF7 62 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 NIT1Q86X76 327 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 Q8N3U1 123 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
SMC1A-206ENST00000470241 COLCA2A8K830 154 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 S100A1P23297 94 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 AMTP48728 403 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 FABP9Q0Z7S8 132 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 GAGE6Q13070 117 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 CHCHD5Q9BSY4 110 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
SMC1A-206ENST00000470241 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 PRSS47A8MTI9 375 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 IGHV3-33P01772 117 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 ESDP10768 282 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 ALKBH7Q9BT30 221 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-206ENST00000470241 MAP1LC3AQ9H492 121 aa7.15□□□□□ -1.26
SMC1A-206ENST00000470241 LOC389332A0A1B0GUA5 103 aa7.14□□□□□ -1.27
SMC1A-206ENST00000470241 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
SMC1A-206ENST00000470241 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
SMC1A-206ENST00000470241 TTC32Q5I0X7 151 aa7.14□□□□□ -1.27
SMC1A-206ENST00000470241 KIR2DL4Q99706 377 aa7.14□□□□□ -1.27
SMC1A-206ENST00000470241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-206ENST00000470241 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-206ENST00000470241 K7EP13 123 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 TCAPO15273 167 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 FCER1GP30273 86 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 RBX1P62877 108 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 Q8N8P6 123 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 DNAH17Q9UFH2 4485 aa7.13□□□□□ -1.27
SMC1A-206ENST00000470241 A0A087WX48 190 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 RAB5AP20339 215 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 PKIAP61925 76 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 C10orf126Q8N4M7 172 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 Q8N976 141 aa7.12□□□□□ -1.27
SMC1A-206ENST00000470241 H7C423 109 aa7.11□□□□□ -1.27
SMC1A-206ENST00000470241 UBE2L6O14933 153 aa7.11□□□□□ -1.27
SMC1A-206ENST00000470241 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-206ENST00000470241 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
SMC1A-206ENST00000470241 KLK12Q9UKR0 248 aa7.11□□□□□ -1.27
SMC1A-206ENST00000470241 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 A0A1B0GUV1 79 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 TRGC2P03986 189 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 FGF6P10767 208 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 BTF3P20290 206 aaKnown RBP7.1□□□□□ -1.27
SMC1A-206ENST00000470241 C6orf223Q8N319 242 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 C18orf32Q8TCD1 76 aa7.1□□□□□ -1.27
SMC1A-206ENST00000470241 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
SMC1A-206ENST00000470241 LINC01546A6NGU7 62 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 LAGE3Q14657 143 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 C1orf134Q5TEV5 83 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 PRSS3P2Q8NHM4 247 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 URB1-AS1Q96HZ7 61 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
SMC1A-206ENST00000470241 K7EMI3 77 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 RTL8CO15255 209 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 ANGP03950 147 aaKnown RBP7.08□□□□□ -1.28
SMC1A-206ENST00000470241 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
SMC1A-206ENST00000470241 AMMECR1LQ6DCA0 310 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 RNASEKQ6P5S7 137 aaKnown RBP7.08□□□□□ -1.28
SMC1A-206ENST00000470241 ENHOQ6UWT2 76 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-206ENST00000470241 MRPL52Q86TS9 123 aaKnown RBP7.08□□□□□ -1.28
SMC1A-206ENST00000470241 UBE2WQ96B02 151 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 UBE2D4Q9Y2X8 147 aa7.08□□□□□ -1.28
SMC1A-206ENST00000470241 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-206ENST00000470241 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
SMC1A-206ENST00000470241 LINC00269Q8N2A0 174 aa7.07□□□□□ -1.28
SMC1A-206ENST00000470241 TMEM18Q96B42 140 aa7.07□□□□□ -1.28
SMC1A-206ENST00000470241 Q9HAA7 133 aa7.07□□□□□ -1.28
SMC1A-206ENST00000470241 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
SMC1A-206ENST00000470241 TRAV8-3A0A0A6YYJ7 113 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 CLPSL2Q6UWE3 100 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 NFE4Q86UQ8 179 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 OR5A1Q8NGJ0 315 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
SMC1A-206ENST00000470241 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
SMC1A-206ENST00000470241 CRPP02741 224 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 LINC00614P0C842 121 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 REG3AQ06141 175 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 Q0VG73 95 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms