RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 CRYBA4P53673 196 aa3.66□□□□□ -1.82
ITGA6-208ENST00000469534 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
ITGA6-208ENST00000469534 ZFAND6Q6FIF0 208 aa3.66□□□□□ -1.82
ITGA6-208ENST00000469534 LINC00173Q6ZV60 143 aa3.66□□□□□ -1.82
ITGA6-208ENST00000469534 SMIM2Q9BVW6 85 aa3.66□□□□□ -1.82
ITGA6-208ENST00000469534 C11orf68Q9H3H3 251 aaKnown RBP3.66□□□□□ -1.82
ITGA6-208ENST00000469534 HHLA3Q9XRX5 114 aa3.66□□□□□ -1.82
ITGA6-208ENST00000469534 DNAH9Q9NYC9 4486 aa3.65□□□□□ -1.82
ITGA6-208ENST00000469534 DEFB131BA0A096LNP1 70 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 H0Y8G0 127 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 H7C1H1 209 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 PPBPP02775 128 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 RPL36AP83881 106 aaKnown RBP3.65□□□□□ -1.83
ITGA6-208ENST00000469534 RHOHQ15669 191 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 ZFP2Q6ZN57 461 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 Q8N8P6 123 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 RPL36ALQ969Q0 106 aaKnown RBP3.65□□□□□ -1.83
ITGA6-208ENST00000469534 VSIG2Q96IQ7 327 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 C18orf15Q96N68 181 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 PRADC1Q9BSG0 188 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 TMEM70Q9BUB7 260 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 NIT2Q9NQR4 276 aa3.65□□□□□ -1.83
ITGA6-208ENST00000469534 IGLV2-18A0A075B6J9 118 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
ITGA6-208ENST00000469534 TRBV6-4A0A1B0GX49 114 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
ITGA6-208ENST00000469534 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 IGLL5B9A064 214 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 HSBP1O75506 76 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 TSHBP01222 138 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 LINC00614P0C842 121 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 BTF3P20290 206 aaKnown RBP3.64□□□□□ -1.83
ITGA6-208ENST00000469534 FCER1GP30273 86 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 AMTP48728 403 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 UBE2D3P61077 147 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 UBE2D2P62837 147 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 RPL39P62891 51 aaKnown RBP3.64□□□□□ -1.83
ITGA6-208ENST00000469534 Q0VG73 95 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 RNASE13Q5GAN3 156 aaKnown RBP3.64□□□□□ -1.83
ITGA6-208ENST00000469534 PIK3CD-AS1Q5SR53 167 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 HIST3H2BBQ8N257 126 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 NDUFAF3Q9BU61 184 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 PRO0255Q9UI72 69 aa3.64□□□□□ -1.83
ITGA6-208ENST00000469534 TRBV7-3A0A075B6L6 115 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 A0A096LNJ9 63 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 TRAV10A0A0B4J240 114 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 IGHV1-24A0A0C4DH33 117 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 TRBV6-5A0A0K0K1A5 114 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 TEX48A0A1B0GUV7 120 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 C5orf52A6NGY3 159 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 I3L3M4 83 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 S100A2P29034 98 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 AKR1D1P51857 326 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 POLR2KP53803 58 aaKnown RBP3.63□□□□□ -1.83
ITGA6-208ENST00000469534 GAGE6Q13070 117 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
ITGA6-208ENST00000469534 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 ATP6V0E2Q8NHE4 81 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 OPRPNQ99935 248 aaPredicted RBP3.63□□□□□ -1.83
ITGA6-208ENST00000469534 C20orf78Q9BR46 151 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
ITGA6-208ENST00000469534 IGKV3OR2-268A0A0C4DH90 116 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 LOC105371267A0A1B0GV96 52 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 VCYO14598 125 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 NHLRC4P0CG21 123 aaPredicted RBP3.62□□□□□ -1.83
ITGA6-208ENST00000469534 LINC00694P0DN24 101 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 KRTDAPP60985 99 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 COTL1Q14019 142 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 LAGE3Q14657 143 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 OR10D4PQ8NGN7 298 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 DNAJC30Q96LL9 226 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 KIR2DL4Q99706 377 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 CHCHD7Q9BUK0 85 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
ITGA6-208ENST00000469534 LAMTOR2Q9Y2Q5 125 aa3.62□□□□□ -1.83
ITGA6-208ENST00000469534 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 PPP1R17O96001 155 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 IGHV3-30P01768 117 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 HBDP02042 147 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 IGHV3-30-3P0DP02 117 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 IGHV3-30-5P0DP03 117 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 PTTG1IPP53801 180 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 TCTAP57738 103 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 MRPL23Q16540 153 aaKnown RBP3.61□□□□□ -1.83
ITGA6-208ENST00000469534 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
ITGA6-208ENST00000469534 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 C2orf66Q6UXQ4 117 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 SPATA12Q7Z6I5 190 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 CHCHD1Q96BP2 118 aaKnown RBP3.61□□□□□ -1.83
ITGA6-208ENST00000469534 HIST1H2BLQ99880 126 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 PMCHL2Q9BQD1 86 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 CHCHD5Q9BSY4 110 aa3.61□□□□□ -1.83
ITGA6-208ENST00000469534 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
ITGA6-208ENST00000469534 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
ITGA6-208ENST00000469534 PRSS47A8MTI9 375 aa3.6□□□□□ -1.83
ITGA6-208ENST00000469534 TMEM262E9PQX1 116 aa3.6□□□□□ -1.83
ITGA6-208ENST00000469534 UBE2L6O14933 153 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms